Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2675 ATGGGAAATGTTGTGATTTGGTTTCAGATACATGAAGAGGCTAGGAAGTTTGCATATCAAATAGGGGTTAAGGTGGTTGTTGCTTATGGCGGAGCTCCAATAAACCATCAGCTACGAGATCTTGAGAAGGGGGTGGACATTCTCGTCGCAACTCCTAGAAGACTGGTAGATTTGCTGGAGAGAGCTAGAGTTTCACTTCAGATGATCAGATATCTTGCACTAGATGAGGCAGATAGGATGCTGGATATGGGTTTTGAGCCACAAATAAGGAAGATTGTTGAACAAATGGATATGCCCCCTCCAGGTGTAAGACAAATTACGCTATTCAGTGCCACATTTCCTAAAGAGATACAGGTTTAG 360 0.4306 MGNVVIWFQIHEEARKFAYQIGVKVVVAYGGAPINHQLRDLEKGVDILVATPRRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQITLFSATFPKEIQV* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2675 119 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 119 IPR014001 -
Ahy19g2675 119 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 8 118 - -
Ahy19g2675 119 Pfam DEAD/DEAH box helicase 8 117 IPR011545 GO:0003676|GO:0005524
Ahy19g2675 119 Gene3D - 6 119 IPR027417 -
Ahy19g2675 119 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 52C 8 118 - -
Ahy19g2675 119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 117 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2675 Ahy-Chr19 147790837 147791658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2675 9 116 Eukaryotic Initiation Factors Gene Family AT3G13920 38.889 2.20e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2675 K11594 - aip:110267265 235.343