Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2674 ATGGAAGATTCAGAGGAAGAAGAGCTCCTGAACCTTAGCCTTTCAGTGGCTGCTGATAGGGAAAGAAAGAAAAAGAAAGGAAAGACCATCACAGATAACAACAACAACAACAATATCATGATGATGATGAGTTGTAGTAGTAGCACAACTATGATTACCTCCTTTGATCATGAGGCCTATGAAGCTAAAATCTTTAGGCTTCTACAAATGAGAGATCAAATGCTTAGACAAGATCATAGGAATCATGATAATAGAAACAAAGGAGGAGGAGGAGGAGGAAGCTTTGTTGTTCTTGGGAATAACAACAGCAATGGCCTCCCTTTGATCCATTTGCTTCTCTCAACCGCCACTGCCGTCGACGGTAACAACTTCGGCGCCGCCTTGAACAACCTCACCGACCTCTACCAGAGCGTTTCCCTAACCGGTGACTCAGTGGAGCGTGTTGTGGCCTATTTCTCTGATGGCTTAACCGCAAGGCTTCTCACAAGAAAGTCACCTTTCTATGACATGATCATGGAGGAACCAACTTCTGAGGAAGAGTTTCTTGCTTTCACTGATCTCTATAGAGTCTCTCCCTACTTCCAATTCGCTCATTTCACTGCCAATCAAGCAATCTTGGAGGCCTTCGAAAGGGAGGAAGATCGTAACAACCGTTCCATTCATGTCATCGATTTCGATGTCTCTTATGGCTTCCAGTGGCCTTCTCTGATACAATCGCTATCAGAGAAGGCCACTAGTACCAGCCGTATTTCCCTGAGGGTAACGGGATTCGGGAAGAATCTGAAGGAGCTGCAAGAAACGGAGTCAAGATTAGTGAGCTTCTCTAAGGGATTTAGCAACCTAGTGTTTGAGTTTCAAGGGCTTCTGAGAGGGTCAAGGGTGATAAACCTAAGGAAGAAGAAGAACGAAACGGTGGCAGTCAACTTGGTATCATACTTGAACACGTTGAGTTGTTTCATGAAGATCTCAGACACATTGGGCTTTGTGCATTCACTTAGCCCCTCCATTGTTGTCTTGGTTGAGCAAGAAGGTAGCAGGACCCCAACAAGGACATTCTTGTCAAGATTCACAGACTCGTTGCACTACTTTGCAGCCATGTTCGATTCTCTCGACGATTGTCTTCCGTTGGAGAGTGCTGAGAGGCTCAGGATTGAGAAGAAGCTTCTTGGGAAAGAGATCAAGAACATGCTCAACAACTATGAAAACAACAACATTGGTGATTGTGCTAAGTATGAGAGGATGGAGGCATGGAAGGCGAGGATGGAGAATCATGGTTTTGTTGGGAATAAGATTAGCTCCAAGGCCATGATTCAAGCCAAGCTACTTTTGAAGATGAGGACTCATTATTGTCCAATGCAGTTTGAAGAAGAAGATGACAGCGACGGCGGCGGCGGCGGTGGCGGTTTCAGGGTTTCGGAGAGAGATGAAGGAAGGGCTGTCTCTTTAGGGTGGCAAAATAGGTTTCTTCTTACTGTCTCAGCTTGGCAACCACTTTCTCTAATCTGA 1506 0.4542 MEDSEEEELLNLSLSVAADRERKKKKGKTITDNNNNNNIMMMMSCSSSTTMITSFDHEAYEAKIFRLLQMRDQMLRQDHRNHDNRNKGGGGGGSFVVLGNNNSNGLPLIHLLLSTATAVDGNNFGAALNNLTDLYQSVSLTGDSVERVVAYFSDGLTARLLTRKSPFYDMIMEEPTSEEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEREEDRNNRSIHVIDFDVSYGFQWPSLIQSLSEKATSTSRISLRVTGFGKNLKELQETESRLVSFSKGFSNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLSPSIVVLVEQEGSRTPTRTFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKNMLNNYENNNIGDCAKYERMEAWKARMENHGFVGNKISSKAMIQAKLLLKMRTHYCPMQFEEEDDSDGGGGGGGFRVSERDEGRAVSLGWQNRFLLTVSAWQPLSLI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2674 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 496 IPR005202 -
Ahy19g2674 501 Coils Coil 379 399 - -
Ahy19g2674 501 Pfam GRAS domain family 108 496 IPR005202 -
Ahy19g2674 501 ProSiteProfiles GRAS family profile. 99 496 IPR005202 -
Ahy19g2674 501 PANTHER OSJNBA0084A10.13 PROTEIN 8 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2674 Ahy-Chr19 147763892 147765826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2674 116 499 GRAS Transcription Factor Family AT3G54220 34.351 8.66e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy19g2674 GRAS 1.40E-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2674 - - ahf:112776716 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2674 19 147763892 147765826 Ahy9g2902 9 118237851 118239134 hybridization