Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2656 ATGGCTTCATGGTGCACTGTAGCAGTTCAGTGTGGAAAAATTCAAGCTACAGTTAAGAAACCACTCCTTAATAGGTTTAGGGATCATATAGTTGAAGGTCAAGTTTATAGAATGGCATACTTTACTGTTGTGTCAAATCATGGTAGTTATAGAGCAACTTCTCATGAATTCAAATTGGTTTTCCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATATTATCCCTAAGACTTGTTTCAACATGTTTCCTTTTTCTGAGCTGCTGAACATGACCCAAGATTATGATTTTTTAGTTGGTGTCATTGGTCTTTTAACTTCAGTGGGAGAAGAGAAAGAATATGCAAAAGAGGGGAAAATTGTGAAAATGATTGTGCTTGAATTAACTTTAAAAGATCTTACAGTGAGATGTGCATTGTTTGGGGACTATGTTAATCAAGTAAATCATTTTCTTGCCTCTGGCTATGTGGAGCAGCCTGTTGTAGTCATTCAACTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGCCTTCAAAATGTGATGTATGCCACTCAAATATTATTTAATCCTGATCTTCCTGAAGTTGTTGAATTTAGGCAGAGGTGCAATGGTACCCAGCCACTGTTTATTGCAAATGAGGGTAAAGTTGTCTCCTTGGAAGATGATTTCATACGTTTAACTAGAAAATGTACTATTGAAGAGCTTCAAGATAACAATCAGGTTGTCTTCTTTTGA 735 0.3673 MASWCTVAVQCGKIQATVKKPLLNRFRDHIVEGQVYRMAYFTVVSNHGSYRATSHEFKLVFLHRTTVVAVDEDIIPKTCFNMFPFSELLNMTQDYDFLVGVIGLLTSVGEEKEYAKEGKIVKMIVLELTLKDLTVRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQILFNPDLPEVVEFRQRCNGTQPLFIANEGKVVSLEDDFIRLTRKCTIEELQDNNQVVFF* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2656 244 CDD RPA1_DBD_B_like 101 202 - -
Ahy19g2656 244 Gene3D - 74 207 IPR012340 -
Ahy19g2656 244 CDD RPA1_DBD_A_like 10 67 - -
Ahy19g2656 244 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 31 240 - -
Ahy19g2656 244 SUPERFAMILY Nucleic acid-binding proteins 12 72 IPR012340 -
Ahy19g2656 244 Pfam Domain of unknown function DUF223 13 94 IPR003871 -
Ahy19g2656 244 Gene3D - 5 72 IPR012340 -
Ahy19g2656 244 SUPERFAMILY Nucleic acid-binding proteins 80 203 IPR012340 -
Ahy19g2656 244 PANTHER REPLICATION FACTOR A 1, RFA1 31 240 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2656 Ahy-Chr19 147349030 147351123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2656 12 199 Core DNA Replication Machinery Family AT2G06510 29.146 3.07e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2656 - - adu:110280586 432.565