Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2646 ATGGGTTATTATCTTTCCTATGTTGTTGTGTTGGTCTTGTTCATTTTTGTGGGAGTTTCAGTTTCCTTATCTTCTTCACCAATTGAAGATCAGAAGAGAGATAGGGTCACTGATTTGCCAGGGCAACCCAAGAATGTGGGGTTTGCTCATTATTCTGGCTATGTCACTGTGAATGAGAAGAGTGGGAGTGCATTGTTCTACTGGCTCTTTGAGGCTCCGGCGAGCCGCCGACCGGAGAAGAGACCACTGGTTTTGTGGCTCAATGGTGGCCCTGGATGCTCCTCCATTGCTTATGGTGCATCTGAAGAAATTGGCCCTTTTAGGATTAGGCCTGATGGGAAGTCACTTTACTTGAACCCTTATGCTTGGAACAAATTGGCAAACATATTGTTCCTTGATTCTCCTGCTGGTGTCGGATTTTCGTACTCGAATAAGACGACGGATCTGTACACATTTGGTGACCAGAGAACAGCTGAAGATGCATATACATTTCTTGTTAAGTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAGTTCTACATTGCTGGAGAAAGCTATGCAGGGCACTATGTTCCTCAGTTGTCTCAAATTGTTTATGAGAGAAACAAGGGAATCAAGAATCCAGTGATAAATTTCAAGGGATTTATGGTTGGAAATGCTGTTACTGATGATTATCATGATTATGTTGGAACATTTGAGTATTGGTGGACTCATGGTTTGGTATCGGATTCCACATACAGGATGCTGAGAATTGCTTGTGATTTCGGTTCTTCACAGCATCCATCAGTGCCTTGCATGCAGGCCCTTAAAGTTGCAGTTGTGGAGCAGGGTAACATTGATCCTTATAGCATTTATACGCAGCCTTGTAACGATACATCGTCACTCAGACGCGACTTGGGGGGTCGCTATCCGTGGATGTCTCGAGCATACGATCCTTGCACTGAGAGGTATTCCGACTTGTATTTCAATCATCCAGAAGTTCAGAAGGCACTTCATGCCAATGTAACCGGAATTCCTTATTCATGGAAGACTTGCAGTGATATTGTGGGGAACTATTGGACTGATTCTCCTCTAACTATGCTTCCTATATATCGCGAACTTATTAGTGCTGGTCTCAAGATATGGGTATACAGTGGAGACACTGATTCAGTGGTTCCAGTCACTGCGACTCGATATTCAATCGACGCATTGAAGCTACCAACCCTCACCAACTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGTTGGAGTCAAGTTTACAAAGGACTCACATTAGTAACTGTAAGAGGAGCCGGCCATGAGGTTCCGCTTCATCGGCCGCGCCAAGCCTTCATTCTTTTCAGGTCTTTCTTGGAGGACAAGCCAATGCCATCTTCAAGTTAG 1389 0.4435 MGYYLSYVVVLVLFIFVGVSVSLSSSPIEDQKRDRVTDLPGQPKNVGFAHYSGYVTVNEKSGSALFYWLFEAPASRRPEKRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGKSLYLNPYAWNKLANILFLDSPAGVGFSYSNKTTDLYTFGDQRTAEDAYTFLVKWFERFPQYKHREFYIAGESYAGHYVPQLSQIVYERNKGIKNPVINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLRIACDFGSSQHPSVPCMQALKVAVVEQGNIDPYSIYTQPCNDTSSLRRDLGGRYPWMSRAYDPCTERYSDLYFNHPEVQKALHANVTGIPYSWKTCSDIVGNYWTDSPLTMLPIYRELISAGLKIWVYSGDTDSVVPVTATRYSIDALKLPTLTNWYPWYDNGKVGGWSQVYKGLTLVTVRGAGHEVPLHRPRQAFILFRSFLEDKPMPSSS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2646 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 460 IPR001563 GO:0004185|GO:0006508
Ahy19g2646 462 Gene3D alpha/beta hydrolase 30 292 IPR029058 -
Ahy19g2646 462 Pfam Serine carboxypeptidase 40 454 IPR001563 GO:0004185|GO:0006508
Ahy19g2646 462 PANTHER CARBOXYPEPTIDASE 11 460 - -
Ahy19g2646 462 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Ahy19g2646 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 425 442 IPR033124 GO:0004185
Ahy19g2646 462 Gene3D - 314 350 - -
Ahy19g2646 462 SUPERFAMILY alpha/beta-Hydrolases 31 459 IPR029058 -
Ahy19g2646 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Ahy19g2646 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Ahy19g2646 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Ahy19g2646 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Ahy19g2646 462 Gene3D - 361 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2646 Ahy-Chr19 147062308 147066411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2646 324 458 Calmodulin-binding Proteins AT2G22960 27.941 4.92e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2646 K16297 - gmx:100805722 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2646 19 147062308 147066411 Ahy19g2646 19 147062308 147066411 ECH
Ahy19g2646 19 147062308 147066411 Ahy9g2927 9 118583554 118587649 hybridization