Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy19g2502 | ATGGCTGAAGGATGTGGTGGGAACTCAGTTGCAACCACTTCTCCTGCTTCATTCAATTGGTGGTACCTCCATGCAAATCATGCTACTAATACTAACGCATATAATAATCATCATCATCACCAAACAAACCCTAATAATTCTTCATCATGTTCTTGTGAGGAGGATATATCTGTTTCAACATCTTTCACTAATGCCTCCAACCATTCAACCCTCACTGTTGATTCTTCCCGAAGGCTTCTTGATCCTTCCTCCAACAACAATCACTTCTTGCCGGAACATGCTGAGGATAATCATCTTTGGAATCATGTTCTATCAGCTGTTGGATCAAACGGGGAGTTGCACAACAAAGAAGAAATGGGAGAAATGAAGTTTCTGGATGCACTATCATCTAAGAACATGACAAGCTCCATGTTTGAAGAACCGGCATGTGACTACTTGAAGAAACTTGACACCACTACTAGTTGGGAATATAGTGGTGGATCAACTTCTTCATCATTCAACAACAGTTTTGAGAAGCACTTGAATAATAATAATAATAATAATGGGTTCAGTGATGATGCATTGATTGAGAATAATGAAAGGTTGACTAAGTTATCTAATCTTGTTAGCACTTGGTCTATTGCCCCACCTGACCCTGAAGTTAGTAGTAGCCACTTTGATCATCCACCAACAAATAATAATCATCATCAATTCCCACAATCTCATCATCATCATGACCCTAATTGTAATTTCAAGCAACAAGTTTTTATTGGAGATTCCACATCATACCCTCCAATCAGTAGCTATGATCATCCCACAAAGGTGAAGGAAGAATTTCATCATCATCAAACAAATAGTGGATTTCAAAATGGATTAATTAATGGCCTTTCTTCAGTGATGGGAGGAGATAGTGGTAATAAATTTTACCATGGTTTGCCAAACCTTTCTTCATGCACAAGAAACATCTCAGATGTTATTTCCTTCAATAGTAGGCTTGGGAGGCCAGTTCTTGGAATCCATGCACAAAAGCCTAATATCAAATACATGAATAATTTATCTGAATCAAAGAAGCAGCAAGGTCTTCAAACAACACCCCCGATAAATAGAAGTAATAATGGAAGAGTAGAGGGGACAACAGCTCGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGAAGCAATCTTGAAGAAGCCTAAGCAAGATACATCCACAGCTTCTTCTACAAAGGTGCAAGCACCCAAAGTCAAGCTGGGGGACAAGATCACAGCCCTTCAACAAATTGTGTCTCCATTTGGAAAGACAGACACAGCTTCGGTGCTGTTTGAAGCAATTGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTAAGCAACCCTTACTTGAAGTCTAATTCCCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATCACCACAAGGAGGATGCAAAATTAGACCTTAGGACTAGAGGACTTTGTTTAGTTCCAACTTCATGTACTCCTCTTATTTACAGAGAGAACAGTGGACCAGATTATTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA | 1557 | 0.3931 | MAEGCGGNSVATTSPASFNWWYLHANHATNTNAYNNHHHHQTNPNNSSSCSCEEDISVSTSFTNASNHSTLTVDSSRRLLDPSSNNNHFLPEHAEDNHLWNHVLSAVGSNGELHNKEEMGEMKFLDALSSKNMTSSMFEEPACDYLKKLDTTTSWEYSGGSTSSSFNNSFEKHLNNNNNNNGFSDDALIENNERLTKLSNLVSTWSIAPPDPEVSSSHFDHPPTNNNHHQFPQSHHHHDPNCNFKQQVFIGDSTSYPPISSYDHPTKVKEEFHHHQTNSGFQNGLINGLSSVMGGDSGNKFYHGLPNLSSCTRNISDVISFNSRLGRPVLGIHAQKPNIKYMNNLSESKKQQGLQTTPPINRSNNGRVEGTTAREVKKKRSEESSEAILKKPKQDTSTASSTKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKSNSHKDPWGSLDRKDHHKEDAKLDLRTRGLCLVPTSCTPLIYRENSGPDYWTPAYRGCLYR* | 519 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy19g2502 | 518 | MobiDBLite | consensus disorder prediction | 391 | 405 | - | - | |
Ahy19g2502 | 518 | MobiDBLite | consensus disorder prediction | 371 | 390 | - | - | |
Ahy19g2502 | 518 | PANTHER | TRANSCRIPTION FACTOR BHLH111 | 22 | 504 | - | - | |
Ahy19g2502 | 518 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 395 | 444 | IPR011598 | GO:0046983 | |
Ahy19g2502 | 518 | MobiDBLite | consensus disorder prediction | 212 | 243 | - | - | |
Ahy19g2502 | 518 | MobiDBLite | consensus disorder prediction | 348 | 370 | - | - | |
Ahy19g2502 | 518 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 22 | 504 | - | - | |
Ahy19g2502 | 518 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 410 | 460 | IPR036638 | GO:0046983 | |
Ahy19g2502 | 518 | CDD | bHLH_AtbHLH_like | 410 | 452 | IPR045239 | - | |
Ahy19g2502 | 518 | Gene3D | - | 408 | 463 | IPR036638 | GO:0046983 | |
Ahy19g2502 | 518 | MobiDBLite | consensus disorder prediction | 348 | 406 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy19g2502 | Ahy-Chr19 | 142999088 | 143003231 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy19g2502 | 17 | 518 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G31050 | 33.463 | 5.89e-50 | 175 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy19g2502 | - | - | gmx:100527800 | 600.897 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g2502 | 19 | 142999088 | 143003231 | Ahy9g3014 | 9 | 119904119 | 119908991 | hybridization |