Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2502 ATGGCTGAAGGATGTGGTGGGAACTCAGTTGCAACCACTTCTCCTGCTTCATTCAATTGGTGGTACCTCCATGCAAATCATGCTACTAATACTAACGCATATAATAATCATCATCATCACCAAACAAACCCTAATAATTCTTCATCATGTTCTTGTGAGGAGGATATATCTGTTTCAACATCTTTCACTAATGCCTCCAACCATTCAACCCTCACTGTTGATTCTTCCCGAAGGCTTCTTGATCCTTCCTCCAACAACAATCACTTCTTGCCGGAACATGCTGAGGATAATCATCTTTGGAATCATGTTCTATCAGCTGTTGGATCAAACGGGGAGTTGCACAACAAAGAAGAAATGGGAGAAATGAAGTTTCTGGATGCACTATCATCTAAGAACATGACAAGCTCCATGTTTGAAGAACCGGCATGTGACTACTTGAAGAAACTTGACACCACTACTAGTTGGGAATATAGTGGTGGATCAACTTCTTCATCATTCAACAACAGTTTTGAGAAGCACTTGAATAATAATAATAATAATAATGGGTTCAGTGATGATGCATTGATTGAGAATAATGAAAGGTTGACTAAGTTATCTAATCTTGTTAGCACTTGGTCTATTGCCCCACCTGACCCTGAAGTTAGTAGTAGCCACTTTGATCATCCACCAACAAATAATAATCATCATCAATTCCCACAATCTCATCATCATCATGACCCTAATTGTAATTTCAAGCAACAAGTTTTTATTGGAGATTCCACATCATACCCTCCAATCAGTAGCTATGATCATCCCACAAAGGTGAAGGAAGAATTTCATCATCATCAAACAAATAGTGGATTTCAAAATGGATTAATTAATGGCCTTTCTTCAGTGATGGGAGGAGATAGTGGTAATAAATTTTACCATGGTTTGCCAAACCTTTCTTCATGCACAAGAAACATCTCAGATGTTATTTCCTTCAATAGTAGGCTTGGGAGGCCAGTTCTTGGAATCCATGCACAAAAGCCTAATATCAAATACATGAATAATTTATCTGAATCAAAGAAGCAGCAAGGTCTTCAAACAACACCCCCGATAAATAGAAGTAATAATGGAAGAGTAGAGGGGACAACAGCTCGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGAAGCAATCTTGAAGAAGCCTAAGCAAGATACATCCACAGCTTCTTCTACAAAGGTGCAAGCACCCAAAGTCAAGCTGGGGGACAAGATCACAGCCCTTCAACAAATTGTGTCTCCATTTGGAAAGACAGACACAGCTTCGGTGCTGTTTGAAGCAATTGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTAAGCAACCCTTACTTGAAGTCTAATTCCCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATCACCACAAGGAGGATGCAAAATTAGACCTTAGGACTAGAGGACTTTGTTTAGTTCCAACTTCATGTACTCCTCTTATTTACAGAGAGAACAGTGGACCAGATTATTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1557 0.3931 MAEGCGGNSVATTSPASFNWWYLHANHATNTNAYNNHHHHQTNPNNSSSCSCEEDISVSTSFTNASNHSTLTVDSSRRLLDPSSNNNHFLPEHAEDNHLWNHVLSAVGSNGELHNKEEMGEMKFLDALSSKNMTSSMFEEPACDYLKKLDTTTSWEYSGGSTSSSFNNSFEKHLNNNNNNNGFSDDALIENNERLTKLSNLVSTWSIAPPDPEVSSSHFDHPPTNNNHHQFPQSHHHHDPNCNFKQQVFIGDSTSYPPISSYDHPTKVKEEFHHHQTNSGFQNGLINGLSSVMGGDSGNKFYHGLPNLSSCTRNISDVISFNSRLGRPVLGIHAQKPNIKYMNNLSESKKQQGLQTTPPINRSNNGRVEGTTAREVKKKRSEESSEAILKKPKQDTSTASSTKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKSNSHKDPWGSLDRKDHHKEDAKLDLRTRGLCLVPTSCTPLIYRENSGPDYWTPAYRGCLYR* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2502 518 MobiDBLite consensus disorder prediction 391 405 - -
Ahy19g2502 518 MobiDBLite consensus disorder prediction 371 390 - -
Ahy19g2502 518 PANTHER TRANSCRIPTION FACTOR BHLH111 22 504 - -
Ahy19g2502 518 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 395 444 IPR011598 GO:0046983
Ahy19g2502 518 MobiDBLite consensus disorder prediction 212 243 - -
Ahy19g2502 518 MobiDBLite consensus disorder prediction 348 370 - -
Ahy19g2502 518 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 504 - -
Ahy19g2502 518 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 410 460 IPR036638 GO:0046983
Ahy19g2502 518 CDD bHLH_AtbHLH_like 410 452 IPR045239 -
Ahy19g2502 518 Gene3D - 408 463 IPR036638 GO:0046983
Ahy19g2502 518 MobiDBLite consensus disorder prediction 348 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2502 Ahy-Chr19 142999088 143003231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2502 17 518 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 33.463 5.89e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2502 - - gmx:100527800 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2502 19 142999088 143003231 Ahy9g3014 9 119904119 119908991 hybridization