Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2501 ATGGCAAGGATCAAGCCTCAGGCTCTTCTGCAACAAAGCAAAAGGAAGAAGGGGCCTTCTCGCATAAGTGCCACCACTATTGTGTTTTACATGTTGATTCTTGCCTTGATTGGGTTTTTCCTCTTCGCTACGTATAGATATTGGTCTAACAGGTCAAGATTTCGATCACAGAATCAATTGGCAGTTTCAGAGCATGAAACTTCGTATGCAGACTCGAAGAAATCCGAGATACCTGGATATGCTGTTTTAGATACCTCTAAAGGCTCAATAATAGTAGAACTGAACAAGGATAATTCTCCTGAGGCTGTTGATGAATTCATTGACTTATGTCAAAAGGGGCATTTCAAAGGGATGCTGTTTCACCGAGTAATTAAGCACTATGTGATTCAGGCTGGGGATAACCAAGGAGCAGGAGCTACTGAAGATTGGAACTTGAGGGGAAAGCAACCCACAAGTGTGAAACATGAAGCATTCATGCTTGGAACTTCCAAGGGCAAGCACACCAACAAAGGATTTGATCTTTTCATTACGACTGCACCGATACCAGATCTGAATGAGAAGCTTATTGTGTTTGGGCGAGTCGTCAAGGGAGAGGATGTTGTTCAGGAAATTGAAGAAGTGGATACAGATGAACATTACAAACCTAAAGTCTCTATTGGGATACTTGATGTCACTCTTAAACAGAAGATCTGA 693 0.4199 MARIKPQALLQQSKRKKGPSRISATTIVFYMLILALIGFFLFATYRYWSNRSRFRSQNQLAVSEHETSYADSKKSEIPGYAVLDTSKGSIIVELNKDNSPEAVDEFIDLCQKGHFKGMLFHRVIKHYVIQAGDNQGAGATEDWNLRGKQPTSVKHEAFMLGTSKGKHTNKGFDLFITTAPIPDLNEKLIVFGRVVKGEDVVQEIEEVDTDEHYKPKVSIGILDVTLKQKI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2501 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 224 IPR002130 GO:0000413|GO:0003755
Ahy19g2501 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 230 - -
Ahy19g2501 230 SUPERFAMILY Cyclophilin-like 76 226 IPR029000 -
Ahy19g2501 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 226 IPR002130 GO:0000413|GO:0003755
Ahy19g2501 230 Gene3D - 63 230 IPR029000 -
Ahy19g2501 230 CDD cyclophilin 82 223 - -
Ahy19g2501 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Ahy19g2501 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Ahy19g2501 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Ahy19g2501 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2501 Ahy-Chr19 142982543 142986286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2501 79 226 U-box Gene Family AT5G67530 33.548 8.00e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2501 - - gmx:100781538 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2501 19 142982543 142986286 Ahy9g3015 9 119918849 119922628 hybridization