Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2496 ATGATGCCCCCAGAGCAAGAAAGCAATATTGCACCCAACATTAGTCCTGCGATTGCGAACCGAACCGGTGATGCTGAACCGGTGGAGGGTTGTCCTGTCACCAATAATAACAAAGTTATACCAAGTTCGGATAATAATAATAATAATAACAATGATGCCATTCATGATGAACACCGTCAACCAACAACAACAGCAGCAGCAGCAACAGCAACAAGATTTTCTATTCTTCAACAATCTTTGCGTCCTATTACCCTAAAATTTGAGGACGTATCATACAGCATAAGCTTCCCAAGGAAAAAGAAGAATGGCTGCTTCTTGCATCAAGAGCCAAAGCACAGAAGGAAAATACTCAGCAGCGTCACCGGCGTCGCTCGTCCCGGGGAGCTAACGGCAATGCTGGGGCCGTCCGGGAGCGGCAAGACAACTCTCTTGACCGCGCTCGCCGGTCGCCTCGACGGAAAAGTTTCCGGCTCCATAACTTACAACGGCCGCCACGACACCGCCGCCGTGAAGCGCAAGATAGGCTTCGTCTCCCAAGACGACGTACTCTACCCTCACCTGACCGTCCAAGAAACCCTAAATTACGCCGCCATGCTGAGGCTCCCGAAGACGCTCACCAAGGAAGAGAAGCTTCAGCATGCAGACGCGATTATCGCGGAACTCGGCCTCACGCGGTGCCGGAACAGTCCCGTCGGCGGCGGAGTGTCGATTATCCGGGGAATCTCCGGAGGAGAGAGGAAAAGAGTGAGTATAGGTCTTGAGATGCTGATAAACCCTAGTTTGTTGTTTCTCGACGAGCCTACGTCGGGGCTGGACTCCACGACGGCTCAGCTGATCATGTCGGTGGTGCGAGGGCTCGCCCGCGGCGGCCGGACGGTGGTGACGACGATTCACCAGCCGTCGAGCCGGCTTTACAGGATGTTTGATAAGGTGGTGGTGCTTAGCGACGGGCAGCCGATTTATTCCGGTCAATCGGGTCGGGTCATGGAGTATCTTGAATGCATCGGGTATGCGCCAGCTTTCAACTTCGTCAACCCTGCTGATTTCCTTCTTGACCTTGCAAATGGCATAGTTGCTGATGTCAAACATGACGATAATGTTGAACATCATGAGGATCAAGCATCAATCAAACAGTCCCTAATTTCATCCTACAAGAAGAACTTGTATCCTGCTCTTAAAGAAGAGATTCAACGAAATAATATTGACTCAGTAATATCATCAGGAACACCAAGAAGTTCTGATAATCAATGGAACACAACCTGGTGGGAGCAATTGAAGGTGTTACTTAAGAGGGGTTTACAAGAGAGAAGGCATGAATCCTTTTCTGGCCTTCGAATCTTCCAAGTTTTGTCTGTGTCCATTCTCTCAGGGCTTCTTTGGTGGCATTGTGATCACTCACACATACAAGATCAGGTTGGACTCCTTTTCTTCTTCTCAATTTTCTGGGGATTCTTCCCTCTCTTCAATGCTATCTTTGCATTTCCTCTGGAGAGGCCAATGCTTGTGAAAGAAAGATCATCAGGAATGTACCATCTGTCCTCATACTACGTGGCACGAATGCTTGGAGACTTGCCAATGGAGCTTGTCCTCCCTACAATCTTTGTAAGCATCAGCTACTGGATGGGAGGACTAAAGCCTTCAGTAGTGACATTTGTGCTAACCCTCTTGATCATGCTTTTCAATGTCCTTGTATCCCAAGGAATAGGCCTAGCACTCGGTGCAATCCTCATGGATGTGAAGCAAGCCACGACTCTAGCCTCAGTGACCATGCTGGTGTTTCTCTTGGCTGGTGGCTACTACATTCAACATATGCCGCCCTTCATAGAATGGTTGAAGTATGTCTCCTTCAGTCACTACTGCTATAAGCTCCTTGTAGGAGTTCAGTATCCAGAAAATGATGTGTATGATTGTGGACATGGCTTGCTTTGTAGAGTAAGAGACTTTCCTGCTATAAAGTGTTTGGGGATTGAAAATTTGTGGGAAGATGTTGCAACATTGACTCTGATGTTAATTGGATACAGAGTTGTCGCATATTTAGCTTTGAGGATGGGGCAGCCTCACTGA 2064 0.4826 MMPPEQESNIAPNISPAIANRTGDAEPVEGCPVTNNNKVIPSSDNNNNNNNDAIHDEHRQPTTTAAAATATRFSILQQSLRPITLKFEDVSYSISFPRKKKNGCFLHQEPKHRRKILSSVTGVARPGELTAMLGPSGSGKTTLLTALAGRLDGKVSGSITYNGRHDTAAVKRKIGFVSQDDVLYPHLTVQETLNYAAMLRLPKTLTKEEKLQHADAIIAELGLTRCRNSPVGGGVSIIRGISGGERKRVSIGLEMLINPSLLFLDEPTSGLDSTTAQLIMSVVRGLARGGRTVVTTIHQPSSRLYRMFDKVVVLSDGQPIYSGQSGRVMEYLECIGYAPAFNFVNPADFLLDLANGIVADVKHDDNVEHHEDQASIKQSLISSYKKNLYPALKEEIQRNNIDSVISSGTPRSSDNQWNTTWWEQLKVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHCDHSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLVKERSSGMYHLSSYYVARMLGDLPMELVLPTIFVSISYWMGGLKPSVVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQHMPPFIEWLKYVSFSHYCYKLLVGVQYPENDVYDCGHGLLCRVRDFPAIKCLGIENLWEDVATLTLMLIGYRVVAYLALRMGQPH* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2496 687 ProSitePatterns ABC transporters family signature. 241 255 IPR017871 GO:0005524
Ahy19g2496 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 341 IPR003439 GO:0005524
Ahy19g2496 687 Pfam ABC transporter 120 269 IPR003439 GO:0005524
Ahy19g2496 687 CDD ABCG_EPDR 82 323 - -
Ahy19g2496 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 56 684 - -
Ahy19g2496 687 SMART AAA_5 126 318 IPR003593 -
Ahy19g2496 687 Pfam ABC-2 type transporter 298 385 IPR043926 GO:0140359
Ahy19g2496 687 Gene3D - 77 335 IPR027417 -
Ahy19g2496 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 56 684 - -
Ahy19g2496 687 MobiDBLite consensus disorder prediction 1 63 - -
Ahy19g2496 687 MobiDBLite consensus disorder prediction 35 50 - -
Ahy19g2496 687 Pfam ABC-2 type transporter 423 629 IPR013525 GO:0016020|GO:0140359
Ahy19g2496 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 334 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2496 Ahy-Chr19 142861602 142866380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2496 124 330 Calmodulin-binding Proteins AT2G36910 25.352 4.92e-11 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2496 19 142861602 142866380 Ahy9g3019 9 120012387 120016951 hybridization