Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2484 ATGGGTCAAGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAATATGAGCAGGAGGAAGAAAAATATGAGGAAGTTGACGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTTGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCGAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGTGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCACAAAATAATTACGGCATTGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTAATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTTCCTGGGCATAGATTCATGTCTGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTTGGCAGATATATCGGGCATTAGCAAATCAGGCATGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTATCCGGTGATGCATATGCAGCTTTGAAGTATCTAGAAGATCAAGCAACAAATGATCCTTCTCTCTATTTTAATCATCACATGGATGCCGATGGTACTTTGCACAATTTATTCTGGTGCAATGGTCTCAGTAGGGCAGACTACTCATTATTTGGTGATGTGCTGGCTTTTAATGCTACCTATAAGAGGAATAAATATATGTGTCCACTTGTGGTATTTTCTGGTGTCAATCATCACAATCAAACAATTATCTTTGCTGCTGCTTTAATTTGCGATGAGAAAAAAGACACATATAGGTGGTTGCTACAACAACTGAAGGTGGCAATGAATGGGAAAGCACCTGTTTCGGTGATCACGGATGGTGATCTATCAATGAAGTTCGCCATTGAAAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTCGCAATGCAACAAGTAACATTGGCAAGCCCCAGTTTACCTCCATGTTTAAAAAGTGTATGCTAGGCGACTATGAAATTGATGTATTTCATCAAAAGTGGTTTGAAATAGTTGAGGAATTTGGTGTCAAAAACAAGAATTGGGTCCTAGATATATATATAAAAAGAGACATTCATGGGCAACTGCACATATAA 1365 0.3985 MGQEFSHEGVNSEHTSYDQYEQEEEKYEEVDVDYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRTRKSRVGALKLKNFVCHREGFRPQNNYGIGNLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSNEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKKGGISVWQIYRALANQACGYEYLSFTQRDMYNKIAKQRRQLSGDAYAALKYLEDQATNDPSLYFNHHMDADGTLHNLFWCNGLSRADYSLFGDVLAFNATYKRNKYMCPLVVFSGVNHHNQTIIFAAALICDEKKDTYRWLLQQLKVAMNGKAPVSVITDGDLSMKFAIEKEFPNAHHRLCAWHLIRNATSNIGKPQFTSMFKKCMLGDYEIDVFHQKWFEIVEEFGVKNKNWVLDIYIKRDIHGQLHI* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2484 454 MobiDBLite consensus disorder prediction 1 16 - -
Ahy19g2484 454 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Ahy19g2484 454 Pfam MULE transposase domain 299 393 IPR018289 -
Ahy19g2484 454 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 444 IPR031052 GO:0006355
Ahy19g2484 454 MobiDBLite consensus disorder prediction 1 28 - -
Ahy19g2484 454 PANTHER OS02G0262500 PROTEIN 77 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2484 Ahy-Chr19 142466752 142468116 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g2484 MULE 1.10E-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2484 - - ahf:112723376 877.085