Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2468 ATGGCCGGATCATCCTGGTTGGTAGACAAAAGTAGAATTGCAACCAAAATAAAGAGTGCATCTGGAGCAAGTGGGAAAGTTTTATGGAAAAGCAATCCTACCAGAACTTGTCCGAATTGTCAACATGTTATTGATAACAGTGATGTGGCACAAGAGTGGCCTGGATTACCAAAAGGTGTGAAATTTGATCCATCTGATCAAGAAATAATATCGCACTTGCTTGCAAAAGTTGGTGCAGCAGGTTCAGAGCCTCACCCTTTCATTGATGAATTTATTGCTACTCTTGAAGTGGATGATGGAATTTGTTATACACATCCTAAACATTTACCAGGTGTCAAGCAAGATGGTAGTGCTACACACTTTTTCCACAGATCAATCAAGGCTTATAATACCGGCAATCGAAAGCGTCGGAAAATAAATGACCAGGACTCTGGCGATGTCCGTTGGCACAAGACTGGAAAAACTAAACCTGTCGTCTCGGACGGGGTTCAGAGAGGCTGTAAAAAGATTATGGTTCTATATATGACTTCAGTTAGAGGAGTAAAAGCTGAGAAAACTAACTGGGTTATGCATCAATATCACCTCGGGACAGACGAAGATGAAAAGGAAGGAGAGTATGTTATCTCTAAAGTGTTTTACCAGCAACAAGTTAAGTTTGGTGAAAAAGATGATCATGATGTTCCTGGAACCAATGAAGCAACTGTTGTGAAAGATGATCCAGTCACTTCCAAATCTCTGACTTCGGAACCTCCTCATAGTGAAAAGCAATGTTCAGATCTCGACATAGGAGAAAAAACACATCAGATTCTTCAGGGTCCTCAGACAGATTGTGTAGAAGACATTCAAGTCGAGTGTGAAGAGATTGTAAAAACTGATGTATCCATGGCAGATGCTCAAAATAATGAAGGAATGGATAGTAGAAATAATGCTGACGGAGAACAAAAATGGTGGGACAGTGAGTCACAGAATTTGTTAGATTCACAACAACTTGTTGAAGCATTGGCCTTGTGTGATGATCTCCTCCATAGCCAGTGTTCCAATAAGGATGATGAAAATGAAGAACACAAGGAGCACTTGAGTCTTTCCATCTATGCTCATCTAGGACCAGAGCATCTGAAGAAAGATCTTGAAGAGTGCCAAAACCTTACTCTTGATCCTGCAAACGTAGAGCTCGAGACACCACCTTCAGAGTTTCGACTAAGTCAGCTGGAATTCGGTTCACAGGATAGCTTTGTTTCCTTTAGCGGCGGCAAGGCAGTCGATTAA 1266 0.4139 MAGSSWLVDKSRIATKIKSASGASGKVLWKSNPTRTCPNCQHVIDNSDVAQEWPGLPKGVKFDPSDQEIISHLLAKVGAAGSEPHPFIDEFIATLEVDDGICYTHPKHLPGVKQDGSATHFFHRSIKAYNTGNRKRRKINDQDSGDVRWHKTGKTKPVVSDGVQRGCKKIMVLYMTSVRGVKAEKTNWVMHQYHLGTDEDEKEGEYVISKVFYQQQVKFGEKDDHDVPGTNEATVVKDDPVTSKSLTSEPPHSEKQCSDLDIGEKTHQILQGPQTDCVEDIQVECEEIVKTDVSMADAQNNEGMDSRNNADGEQKWWDSESQNLLDSQQLVEALALCDDLLHSQCSNKDDENEEHKEHLSLSIYAHLGPEHLKKDLEECQNLTLDPANVELETPPSEFRLSQLEFGSQDSFVSFSGGKAVD* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2468 421 Pfam No apical meristem (NAM) protein 57 195 IPR003441 GO:0003677|GO:0006355
Ahy19g2468 421 Gene3D NAC domain 65 218 IPR036093 GO:0003677|GO:0006355
Ahy19g2468 421 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 414 - -
Ahy19g2468 421 MobiDBLite consensus disorder prediction 222 258 - -
Ahy19g2468 421 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 414 IPR044799 GO:0003700
Ahy19g2468 421 SUPERFAMILY NAC domain 41 214 IPR036093 GO:0003677|GO:0006355
Ahy19g2468 421 MobiDBLite consensus disorder prediction 236 253 - -
Ahy19g2468 421 ProSiteProfiles NAC domain profile. 56 214 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2468 Ahy-Chr19 141984217 141988165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2468 33 218 NAC Transcription Factor Family AT1G28470 57.812 6.72e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy19g2468 NAM 4.60E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2468 - - gmx:100787422 650.588