Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2463 ATGCAGCGACTGAAGACTATGATGGGCTCCCGCGACTACATCCAAGCATTGGAACATGAACGCCGCAAGATTCAGGTCTTCTCCAAAGAGCTTCCTCTTTCCTTGGACCTCGTCACACAAGCCATTGAAGCGTGCAGGCAGCAGTTGTCTGAGACGACGACGGAGTACAACATGAACGGACACAATTCGGAGTGTTCGGAGCAGACAACGTCAACCGACAACGGTCCTGTCTTGGAGGAGTTCATCCCAATTAAGAAGAGACCATCATCTCCACATGAAGAAGAAGAAGATGATGATGACGATGAACAACATTCCCATCATCATCGCCACAAGATCTCGAAGGATAACACTGATAAGAGGAAATCAGATTGGCTTAGATCCGTTCAGTTGTGGAATAATCCAGAACCCTCATCACCACCTCATCAGGAGGTGAACAATAAGAAAGGCGGTGCGGTGGAAGTGAAGAGAAGTGGAAGTGGTGGTGCTTTTCAGCCATTTCACAAGGAGAAGGAGGAAAGAGTAGGTGGTGGTGGCGCCAAGGCAATTGCAAGTGATGATCTGAGACCACCGTGTTCCTCCAACAGCAGCAAGAAGGAAGAGAAAGAGGGGCAGAGGAAGCAGCGCCGTTGCTGGTCTCAGGAGTTGCACAAACGATTCTTGCAAGCCCTTCAACAACTTGGAGGCCCTGATTCTGCCACACCGAAGCAAATCAGGGAGCTTATGAAAGTTGATGGCCTCACTAATGACGAAGTCAAAAGCCATTTACAGAAATACCGGTTACACACTAGAAGACCTAGTGGCATAGTTCACAACAATGGCAATCCACAAACGACGCCGTTTGTCCTAGTAGGCAACATTTTTGTTCAACCGCCAGAATACGCAGCGGCCGTGGCCACGTCAGCAGATCTGGCACCTGCCGGAATATATGCGCCTGTAGCCACGCATCCTCCTCCACCTCCTCCCCGGACGGCGGCTGGTTCCACTAGAAGACCGCAGTTGAAGAAATCATCAAATCACATGCGTGAGGATCATCATCATTCACACTCGGAAGAAGATAGGGTTAATCATTCAAACTCTCCAGCTTCATCATCATCCACACACACCACCACAACTACTTCCCCTGCCTATTGA 1131 0.496 MQRLKTMMGSRDYIQALEHERRKIQVFSKELPLSLDLVTQAIEACRQQLSETTTEYNMNGHNSECSEQTTSTDNGPVLEEFIPIKKRPSSPHEEEEDDDDDEQHSHHHRHKISKDNTDKRKSDWLRSVQLWNNPEPSSPPHQEVNNKKGGAVEVKRSGSGGAFQPFHKEKEERVGGGGAKAIASDDLRPPCSSNSSKKEEKEGQRKQRRCWSQELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSGIVHNNGNPQTTPFVLVGNIFVQPPEYAAAVATSADLAPAGIYAPVATHPPPPPPRTAAGSTRRPQLKKSSNHMREDHHHSHSEEDRVNHSNSPASSSSTHTTTTTSPAY* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2463 376 MobiDBLite consensus disorder prediction 356 376 - -
Ahy19g2463 376 MobiDBLite consensus disorder prediction 310 376 - -
Ahy19g2463 376 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 371 IPR044787 GO:0003700|GO:0006355
Ahy19g2463 376 SUPERFAMILY Homeodomain-like 204 264 IPR009057 -
Ahy19g2463 376 MobiDBLite consensus disorder prediction 55 76 - -
Ahy19g2463 376 MobiDBLite consensus disorder prediction 311 325 - -
Ahy19g2463 376 MobiDBLite consensus disorder prediction 55 209 - -
Ahy19g2463 376 MobiDBLite consensus disorder prediction 126 144 - -
Ahy19g2463 376 MobiDBLite consensus disorder prediction 192 209 - -
Ahy19g2463 376 Pfam Myb-like DNA-binding domain 208 259 IPR001005 -
Ahy19g2463 376 Gene3D - 205 263 - -
Ahy19g2463 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 263 IPR017930 -
Ahy19g2463 376 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 206 261 IPR006447 GO:0003677
Ahy19g2463 376 MobiDBLite consensus disorder prediction 335 355 - -
Ahy19g2463 376 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 9 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2463 Ahy-Chr19 141806938 141808772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2463 1 318 G2-like Transcription Factor Family AT1G68670 46.328 7.50e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy19g2463 Myb_DNA-binding 4.30E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2463 - - adu:107468029 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2463 19 141806938 141808772 Ahy9g1653 9 92189347 92196989 hybridization