Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2341 ATGTCAGGAATGGAAATTTGGCCAGCCGAAGACGAGTCTAGTGAGTCTCTACCACCATTCAATAACAGGAGTGGCTACGATTCGAGAACTGGCATCTACCACTCTCTTGTTAGACTTGGCACCAAGCATGAGATCCCAACAAAGCCTGATCTCAATGTTGCCCATCTCGTGCTATCGCAGTTCCCACAAGGAGACCTTGCAGAGGCAAGAATAGCATTCGTTGATGCAGCAACTGATAAGAGTTTGAGTTATGGCGAGCTACGCAGATCAGTATACTCCCTTGCATCAGCCTTGTTCCATGGACTTGGGGTTAGGAAAGGGGATGTGCTGTTTCTCCTATCCCCTAACTCAATCCTGTTCCCAACCATATGTCTAGCCGTGTTATCAATTGGTGCAGTTCTTACCACTGCCAACCCTCTTAATACCGAGTCAGAAATTGCCAAGCAGGTACGCGACTCAGGTTCTAAACTAGCCATCTCAGCACCGGAGGAGCTACACAAATTGGTCTCAACTGGGGTGCCTACAATGCTCACATATTGTCCATCTAACAGCGGAATGCTATCAGTTGAAGAGTTGATAGAAGGCTGCTCTTGTTCTCTGGAGTTGCCGCAGGTTACTGTGGTTCAATCAGACCCTGCTGCTATACTTTACTCCTCAGGGACTACTGGGGTAAGTAAAGGTGTAGTTTTGACACACCAGAATCTCATTTCCACACTGAAACTTCTCTTCTGGTCTGTTGATGTAAGTGCATCTTCAGATGATGTCTTCTTGGCCTTCATTCCGATGTTTCATGTATACGGCCTGGTTTTCTTTGGATTAGGAATGCTGTGTGTTGGTGTTAAAATAATTGTGATGCAGAAATTTGACTTCCAAGCTATGCTTCTTGCTATTCAGAAGCACAAAGTTAATAACTTACCGGCAGTGCCGCCAGTGATCCTTGCTCTAGTGAAATATGCAAGCAAAGCTGGTTGTGACTTGTCCAGCCTCCGAAGGACGGGTACAGGTGCTGCGCCTTTGAGTAAGGAAGTGTCACGGGAGTTCAGAAAAATGTTTCCATGGGTTGAACTAAGGCAAGGTTATGGCCTAACAGAAAGCTCAGCTGCAGCTACCTTTCTTGTGTCAGACAGGGATGCTAAAGCTCGGCCAGACTCATGCGGCCAGTTGCTTCCAACCTTTTGTGCAAAGGTCGTAGACATTGATACCGGAAAGCCTTTGCCTCCTCAAAAGAAAGGAGAGCTGTGGCTGAAAAGTACTACTATTATGAAAGAGTATCTGGGAAATTCGGAGGCAACAACCCTAACAGTTGATTCAGATGGCTGGCTGAAGACAGGTGATCTCAGTTACATTGATGAAAGTGGATTTGTTTATATAGTTGAACGGATAAAGGAGCTGATCAAGCACAATGGATATCAGGTGGCTCCTGCAGAACTGGAGTCTTTATTGCTAAGCCATCCCCTTATTGTTGATGCAGCTGTTATACCAGTTGAAGATGAAGCAACTGGACAGATACCAATGGCCTATGTTGTGAGAGCAGCTGGTTCTGAACTCTCAGAAGACCAAGTCATTCAATATGTTGCAGGCCAGGTGGCTCCATATAAGAAAGTGAGAAGGGTGAGTTTCATTGAAACTATTCCAAGGTCAGCAGCTGGCAAGATATTGCGCAAGGACCTCGTTTCTCTAAGCAGACAACAACTTGTCTCCAAGTTATGA 1710 0.4579 MSGMEIWPAEDESSESLPPFNNRSGYDSRTGIYHSLVRLGTKHEIPTKPDLNVAHLVLSQFPQGDLAEARIAFVDAATDKSLSYGELRRSVYSLASALFHGLGVRKGDVLFLLSPNSILFPTICLAVLSIGAVLTTANPLNTESEIAKQVRDSGSKLAISAPEELHKLVSTGVPTMLTYCPSNSGMLSVEELIEGCSCSLELPQVTVVQSDPAAILYSSGTTGVSKGVVLTHQNLISTLKLLFWSVDVSASSDDVFLAFIPMFHVYGLVFFGLGMLCVGVKIIVMQKFDFQAMLLAIQKHKVNNLPAVPPVILALVKYASKAGCDLSSLRRTGTGAAPLSKEVSREFRKMFPWVELRQGYGLTESSAAATFLVSDRDAKARPDSCGQLLPTFCAKVVDIDTGKPLPPQKKGELWLKSTTIMKEYLGNSEATTLTVDSDGWLKTGDLSYIDESGFVYIVERIKELIKHNGYQVAPAELESLLLSHPLIVDAAVIPVEDEATGQIPMAYVVRAAGSELSEDQVIQYVAGQVAPYKKVRRVSFIETIPRSAAGKILRKDLVSLSRQQLVSKL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2341 569 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
Ahy19g2341 569 Gene3D - 463 566 IPR045851 -
Ahy19g2341 569 Pfam AMP-binding enzyme C-terminal domain 476 551 IPR025110 -
Ahy19g2341 569 Pfam AMP-binding enzyme 69 466 IPR000873 -
Ahy19g2341 569 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 18 568 - -
Ahy19g2341 569 Gene3D - 41 462 IPR042099 -
Ahy19g2341 569 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 568 - -
Ahy19g2341 569 SUPERFAMILY Acetyl-CoA synthetase-like 69 561 - -
Ahy19g2341 569 CDD 4CL 45 557 - -
Ahy19g2341 569 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2341 Ahy-Chr19 137655379 137658641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2341 21 565 Monolignol Biosynthesis Gene Families AT1G20480 44.681 1.10e-150 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2341 K10526 - gmx:100796728 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2341 19 137655379 137658641 Ahy19g2341 19 137655379 137658641 ECH
Ahy19g2341 19 137655379 137658641 Ahy9g1919 9 105708485 105712088 hybridization