Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2339 ATGAGTCGAATACTCGGTCCCGGTTTCCGCTTCCACCCTACGGACGACGAACTAGTTCAATACTATCTCCGCCGGAAGGTCATCGGAAAACTCAACCACCACGACCACATCGGCGTCATCAATATCTACGACTATGAGCCATGGCAACTCCCCGAATTGTCGAAGCTGAATACTAGAGATTTGGAATGGTATTTCTTCACGGTTCTGGACAAGAAGTACGAGAAGGGGGAGAAGACAAAACGCGCCACCGTCAACGGTTACTGGAAGACCACCGGCAAGGATCGTGGAATCAAGTATGGCGATCGCCAAGTAGGCATGAAGAAGACCCTCGTTTACCATGAAGGAAGGGCCCCGACTGGCAAAAGATCAAATTGGGTTATGCACGAGTACCGGATGGTCGATGAGCAATTGGCGGAAGTCGGATATCAGCTGGACGCTTTTGTGCTGTGTAGAATTTTTGAGAAGAGCGGGATGGGCCCTAAGAATGGAGAGAAGTATGGTGCTCCCTTTAGAGAGGAGGACTGGGTGGAGGATGGCGACCTGCTTGAACCGATTGCTGATGAACCTGTGGTTGAGCTGTCTGTTGACCAGAGTGATGCTTTCCTTGAAACTGATGACCTTGAGAAGAAACTTGGTACGCATGTGGTTGATGGAAGTGCTGATTTACCACCAAACCCTCCCAACTACTTTTATGGGGAGTGTAGTCACTATCCTCAGCATCAAGAAGAATTTGTTGAAGTTCCGAAACCTTTGGAAGGTACTGAAGGCCGGAATTTCGATGTAACTGGGCCATATGCTGAGGATACCTGTTTAGAAAATCATGAAATGAACCATAATGGGAATTCTTCAGGATTCATTTATGGTGATGTTAATTCAGATGAAATCATGGATTCCATTGTTGATCCTCTGATTGGTGCTGAATTATTCCTGGAAACAGATGATCTTCTGAACCCAATCGAGGGAAATTCCTCTGGGGCAGATCCTTATACAGTTGAGGGAAATCACCCCAGGGCCGATCCCTACGCAGCTGAGGGAAATCCCCCTGGGCCAGATCCCTACACAGCTGAGGGAAATTATCCTGGGACAGATCCTTATGCTGTGGATATGTTAGATGAGTATCTTGCACTTCCAGATGATGATATTCTGAGGTATATATCCTTTGATGATTCTCCTCCATCAATGGAGGGTGAAAACCCTATTCTAGAGCAGATACCACCTCTTATACAGCAGAATGTGGAGGAAGAGGCCAAGGATGTTTCAGAGGAGAAACAACAAAAGGTGGAGGGAGAAGCCACAAATATTTTCAAGACAAACAAACATGACCTTGAAGCAAATTCTAGCCGTGGAGGATCTGCTTCAGATGATGCAAATCCAATTGCAAAACGCTTCAAGAAATGGTTGGAAGACATCCCAGCTGCTCCCGCATTTGCTGCAGAGCTTCCATCCAAGAAGGATGCACTCCAGCTTCATTCTGCACCTCAGTCTTCAAATACTACTCATGTAACTGCAGGAATGGTCAGCATTACAAACATTACTGGAAGAGGCAATGACATGAATCCGATGGTGGCAAAGATTGGAGGAGGGTTCAACCATCCCATTATCTCTGCTGTTGTTTTGATACCTGTTTCTGGCTTACTTTGTGGCAAGACTCTGTTTGTGCTGACATATGGATGGGCTTTTCTGGTGACATTTTCATTTCTGTTTGCCACCGTGACTTGCAAAATTGGAACCTTCATGTATTCTGGAAAATGA 1752 0.4612 MSRILGPGFRFHPTDDELVQYYLRRKVIGKLNHHDHIGVINIYDYEPWQLPELSKLNTRDLEWYFFTVLDKKYEKGEKTKRATVNGYWKTTGKDRGIKYGDRQVGMKKTLVYHEGRAPTGKRSNWVMHEYRMVDEQLAEVGYQLDAFVLCRIFEKSGMGPKNGEKYGAPFREEDWVEDGDLLEPIADEPVVELSVDQSDAFLETDDLEKKLGTHVVDGSADLPPNPPNYFYGECSHYPQHQEEFVEVPKPLEGTEGRNFDVTGPYAEDTCLENHEMNHNGNSSGFIYGDVNSDEIMDSIVDPLIGAELFLETDDLLNPIEGNSSGADPYTVEGNHPRADPYAAEGNPPGPDPYTAEGNYPGTDPYAVDMLDEYLALPDDDILRYISFDDSPPSMEGENPILEQIPPLIQQNVEEEAKDVSEEKQQKVEGEATNIFKTNKHDLEANSSRGGSASDDANPIAKRFKKWLEDIPAAPAFAAELPSKKDALQLHSAPQSSNTTHVTAGMVSITNITGRGNDMNPMVAKIGGGFNHPIISAVVLIPVSGLLCGKTLFVLTYGWAFLVTFSFLFATVTCKIGTFMYSGK* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2339 583 SUPERFAMILY NAC domain 5 155 IPR036093 GO:0003677|GO:0006355
Ahy19g2339 583 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
Ahy19g2339 583 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 346 578 - -
Ahy19g2339 583 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 346 578 - -
Ahy19g2339 583 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 255 - -
Ahy19g2339 583 MobiDBLite consensus disorder prediction 323 353 - -
Ahy19g2339 583 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Ahy19g2339 583 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Ahy19g2339 583 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 4 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2339 Ahy-Chr19 137608376 137611817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2339 5 572 NAC Transcription Factor Family AT5G04410 35.821 4.46e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy19g2339 NAM 2.00E-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2339 - - adu:107466644 1192.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2339 19 137608376 137611817 Ahy19g2339 19 137608376 137611817 ECH
Ahy19g2339 19 137608376 137611817 Ahy9g1915 9 105641379 105644840 hybridization