Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2338 ATGGGTCGTGAAACCCTTCTTCATCCACCACCACCATCCACCACCACCGCAACAGCCACACACACCCCACCACCGCCGCCGCCACTGCCGTCTCTACCTTCATTGACCCAAGCAGGACCATCAGGAGGAGTATCAGCATCTGCACCTTCACCATCTGCTTCACCTTCTTCTCCTGCTATTGTTGCTACTACTGCTGTGGCTACTGCAGTTGCTGCTCCTCCTACCTCTCTTGCTCCTGGTTTCAGGTTCCATCCTACGGATGAGGAGCTTGTTATCTATTACCTCAAGCGCAAGGTTTGTGGCAAAAGCTTCCGATTTGATGCAATTTCTGAGGTTGACATCTACAGGAGCGAACCCTGGGACCTTGCAGATAAGTCGAGGTTGAAGACTAGGGACCAAGAATGGTACTTCTTTAGTGCACTGGACAAGAAGTATGGCAATGGTGGGAGGATGAACAGGGCCACAAGCAAAGGATACTGGAAGGCTACAGGGAACGATCGTCCGGTTAAGCATGAACAAAGGACCGTGGGGTTGAAGAAAACTCTGGTGTTCCATAGTGGAAGAGCCCCAGATGGTAAGAGGACCAATTGGGTCATGCATGAGTACCGACTCGTCGACGAAGAGCTGGAGAGGGCTAGGTCTGGATCCTCTCAGCCTCAGGATGCATATGTTTTGTGTAGAGTTTTTCACAAAAATAACATAGGACCTCCGAATGGGCAACGTTATGCACCTTTCGTTGAAGAGGAGTGGGATGATGCATCGGCATTGGTTCCTGGGGCAGAACCTGTAGAGGATGTTACCGTTACTGTTGCTCATCCTCTACGCATTGAAAGCAACGGTCGCACTTTATGCAGCGACAGGAGAAACAATGTTGCACAGGATACTCAATCTAACAACAAAGTTCCATTTGATGTGAACAAGCTTCCCATTGAGACTCAAAGTCTGCTAGCTGTCTGCAAAAGGGAGAGTATGGCCGAGTTTCCATCACCTGAAAAGGAGGATAACTCGAAGCGTCAGATTGATGAGTATCCTTTGCCACAAACAGAAAACACCAAGCCTATCTCCCAAATATACAAAAGGAGGAGGCATTATTTGAATGTCAACCATTCAAATGTCAACGGAGATTCAGTCCGAACCATCCAAGAACCGCCATGTTCATCAACAATAACCACCGCCGCAACGACGCTCCCGACGGCCACCACCACAGCCTCCACTGCGATAACCAACGTTGCACCCAAAAAACATTTCTTGTCTGCACTGGTGGAGTTTTCCTTGATGGAATCCCTCGAATCGAAGGGAAATCCATCCGTTCAACCACCAGAGTTTGATGATGCTTCCTTAGAGGCATCCGTGCCGCCAAATTGTGTTAAGCTCATCAAACGCATGCAGGGCGAGATTTACAAACTTTCCGAGGAAAGGGAGACTATGAGGTTTGAGATGATGAGCGCACAAGCAATGATTAACATGCTCGAGTCGCGCATTGAAATTTTGAGCAAAGAAAATGAGGAACTGAAGAGCATGATTAACAACAATCCTTAG 1539 0.4841 MGRETLLHPPPPSTTTATATHTPPPPPPLPSLPSLTQAGPSGGVSASAPSPSASPSSPAIVATTAVATAVAAPPTSLAPGFRFHPTDEELVIYYLKRKVCGKSFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVKHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDEELERARSGSSQPQDAYVLCRVFHKNNIGPPNGQRYAPFVEEEWDDASALVPGAEPVEDVTVTVAHPLRIESNGRTLCSDRRNNVAQDTQSNNKVPFDVNKLPIETQSLLAVCKRESMAEFPSPEKEDNSKRQIDEYPLPQTENTKPISQIYKRRRHYLNVNHSNVNGDSVRTIQEPPCSSTITTAATTLPTATTTASTAITNVAPKKHFLSALVEFSLMESLESKGNPSVQPPEFDDASLEASVPPNCVKLIKRMQGEIYKLSEERETMRFEMMSAQAMINMLESRIEILSKENEELKSMINNNP* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2338 512 PANTHER NAC DOMAIN-CONTAINING PROTEIN 78-LIKE 69 509 - -
Ahy19g2338 512 MobiDBLite consensus disorder prediction 35 58 - -
Ahy19g2338 512 MobiDBLite consensus disorder prediction 325 340 - -
Ahy19g2338 512 MobiDBLite consensus disorder prediction 1 58 - -
Ahy19g2338 512 MobiDBLite consensus disorder prediction 16 34 - -
Ahy19g2338 512 ProSiteProfiles NAC domain profile. 77 231 IPR003441 GO:0003677|GO:0006355
Ahy19g2338 512 Coils Coil 480 507 - -
Ahy19g2338 512 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 69 509 - -
Ahy19g2338 512 MobiDBLite consensus disorder prediction 325 354 - -
Ahy19g2338 512 Pfam No apical meristem (NAM) protein 79 204 IPR003441 GO:0003677|GO:0006355
Ahy19g2338 512 Gene3D NAC domain 86 234 IPR036093 GO:0003677|GO:0006355
Ahy19g2338 512 SUPERFAMILY NAC domain 67 232 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2338 Ahy-Chr19 137577541 137583645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2338 420 505 NAC Transcription Factor Family AT3G10480 41.111 1.83e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy19g2338 NAM 5.00E-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2338 - - adu:107466647 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2338 19 137577541 137583645 Ahy9g1914 9 105602764 105609152 hybridization