Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2325 ATGTTTTCAAGGTTGATACATCCCCGCGACGGTGGCGGTGATGGCGACGGAGTGGAAGAGATGATGGTGCAGGGCGGAGGAGGTGGAGAGCCGTCTCTGGTTTTGACCTCTGATCCGAAGCCTCGGCTTCGTTGGACCACGGACCTCCATGAACGCTTCGTTGATGCTGTCACTCAACTCGGCGGTGCCACCAAAGCCACACCAAAAGCGATTTTGCGGACAATGAATGTCAAGGGTTTGACTCTATATCACTTAAAGAGTCATCTGCAGAAATACAGGCTTGGTAAGCAATCTGGAAAAGATTTTGATGAGGGATGCAAAGATGCTTCGTACCCTCTGGAAAGCCCCAGTACAAATAACTCATCTCCTAAGCCGTCTTATGATGCTAATGAGGGCCAAGAAGTAAAGGAAGCATTAAGGGCACAAATGGAAGTGCAAAGTAAACTACATTTGTTAGTGGAGGTACTGTTGCAGGCAGAGAAGCACTTGCTAATTTGCCAGGATGCTGAACAGACATATATGGTCATGCTTGAGAGAGCTTGCAAGATGTTGGCTGATCAAATTATTAGCAATCCAATGGTCGACACAGGTAGCCAAAGGTTGGAAGGATTGCATGTTTCGGAACTGCCGGTGCCGTCGCTTATTCTGCTGCCCCAGGGAACTGAAAGCTGCCTAACATCACTTGAGAATCTCGGAGGATTGACGCTGGAAGGATCTCCAAGCGGGGCAAGGAAGAGAATTCTGAATTTAGACTCAGTGGTAGCTCCTTTGATGTGGAACGAAGCTAACATGAGAACTCAGGGTATCCATTCAAGTCAAGTGAATCCTCATCACGAAATAACTGGGTATGGTATGTAG 858 0.4779 MFSRLIHPRDGGGDGDGVEEMMVQGGGGGEPSLVLTSDPKPRLRWTTDLHERFVDAVTQLGGATKATPKAILRTMNVKGLTLYHLKSHLQKYRLGKQSGKDFDEGCKDASYPLESPSTNNSSPKPSYDANEGQEVKEALRAQMEVQSKLHLLVEVLLQAEKHLLICQDAEQTYMVMLERACKMLADQIISNPMVDTGSQRLEGLHVSELPVPSLILLPQGTESCLTSLENLGGLTLEGSPSGARKRILNLDSVVAPLMWNEANMRTQGIHSSQVNPHHEITGYGM* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2325 285 MobiDBLite consensus disorder prediction 112 128 - -
Ahy19g2325 285 SUPERFAMILY Homeodomain-like 40 96 IPR009057 -
Ahy19g2325 285 Pfam Myb-like DNA-binding domain 43 93 IPR001005 -
Ahy19g2325 285 MobiDBLite consensus disorder prediction 1 38 - -
Ahy19g2325 285 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 40 95 IPR006447 GO:0003677
Ahy19g2325 285 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 205 - -
Ahy19g2325 285 Pfam MYB-CC type transfactor, LHEQLE motif 134 183 IPR025756 -
Ahy19g2325 285 Gene3D - 39 97 - -
Ahy19g2325 285 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 202 284 IPR044848 GO:0003700
Ahy19g2325 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 97 IPR017930 -
Ahy19g2325 285 MobiDBLite consensus disorder prediction 105 133 - -
Ahy19g2325 285 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 202 284 - -
Ahy19g2325 285 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 205 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2325 Ahy-Chr19 136833304 136835354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2325 29 258 G2-like Transcription Factor Family AT3G24120 43.902 6.77e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy19g2325 Myb_DNA-binding 1.00E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2325 - - aip:107619379 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2325 19 136833304 136835354 Ahy9g1903 9 105345090 105347036 hybridization