Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy19g2325 | ATGTTTTCAAGGTTGATACATCCCCGCGACGGTGGCGGTGATGGCGACGGAGTGGAAGAGATGATGGTGCAGGGCGGAGGAGGTGGAGAGCCGTCTCTGGTTTTGACCTCTGATCCGAAGCCTCGGCTTCGTTGGACCACGGACCTCCATGAACGCTTCGTTGATGCTGTCACTCAACTCGGCGGTGCCACCAAAGCCACACCAAAAGCGATTTTGCGGACAATGAATGTCAAGGGTTTGACTCTATATCACTTAAAGAGTCATCTGCAGAAATACAGGCTTGGTAAGCAATCTGGAAAAGATTTTGATGAGGGATGCAAAGATGCTTCGTACCCTCTGGAAAGCCCCAGTACAAATAACTCATCTCCTAAGCCGTCTTATGATGCTAATGAGGGCCAAGAAGTAAAGGAAGCATTAAGGGCACAAATGGAAGTGCAAAGTAAACTACATTTGTTAGTGGAGGTACTGTTGCAGGCAGAGAAGCACTTGCTAATTTGCCAGGATGCTGAACAGACATATATGGTCATGCTTGAGAGAGCTTGCAAGATGTTGGCTGATCAAATTATTAGCAATCCAATGGTCGACACAGGTAGCCAAAGGTTGGAAGGATTGCATGTTTCGGAACTGCCGGTGCCGTCGCTTATTCTGCTGCCCCAGGGAACTGAAAGCTGCCTAACATCACTTGAGAATCTCGGAGGATTGACGCTGGAAGGATCTCCAAGCGGGGCAAGGAAGAGAATTCTGAATTTAGACTCAGTGGTAGCTCCTTTGATGTGGAACGAAGCTAACATGAGAACTCAGGGTATCCATTCAAGTCAAGTGAATCCTCATCACGAAATAACTGGGTATGGTATGTAG | 858 | 0.4779 | MFSRLIHPRDGGGDGDGVEEMMVQGGGGGEPSLVLTSDPKPRLRWTTDLHERFVDAVTQLGGATKATPKAILRTMNVKGLTLYHLKSHLQKYRLGKQSGKDFDEGCKDASYPLESPSTNNSSPKPSYDANEGQEVKEALRAQMEVQSKLHLLVEVLLQAEKHLLICQDAEQTYMVMLERACKMLADQIISNPMVDTGSQRLEGLHVSELPVPSLILLPQGTESCLTSLENLGGLTLEGSPSGARKRILNLDSVVAPLMWNEANMRTQGIHSSQVNPHHEITGYGM* | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy19g2325 | 285 | MobiDBLite | consensus disorder prediction | 112 | 128 | - | - | |
Ahy19g2325 | 285 | SUPERFAMILY | Homeodomain-like | 40 | 96 | IPR009057 | - | |
Ahy19g2325 | 285 | Pfam | Myb-like DNA-binding domain | 43 | 93 | IPR001005 | - | |
Ahy19g2325 | 285 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Ahy19g2325 | 285 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 40 | 95 | IPR006447 | GO:0003677 | |
Ahy19g2325 | 285 | PANTHER | MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN | 2 | 205 | - | - | |
Ahy19g2325 | 285 | Pfam | MYB-CC type transfactor, LHEQLE motif | 134 | 183 | IPR025756 | - | |
Ahy19g2325 | 285 | Gene3D | - | 39 | 97 | - | - | |
Ahy19g2325 | 285 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 202 | 284 | IPR044848 | GO:0003700 | |
Ahy19g2325 | 285 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 37 | 97 | IPR017930 | - | |
Ahy19g2325 | 285 | MobiDBLite | consensus disorder prediction | 105 | 133 | - | - | |
Ahy19g2325 | 285 | PANTHER | MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN | 202 | 284 | - | - | |
Ahy19g2325 | 285 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 2 | 205 | IPR044848 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy19g2325 | Ahy-Chr19 | 136833304 | 136835354 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy19g2325 | 29 | 258 | G2-like Transcription Factor Family | AT3G24120 | 43.902 | 6.77e-56 | 180 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Ahy19g2325 | Myb_DNA-binding | 1.00E-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy19g2325 | - | - | aip:107619379 | 557.37 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g2325 | 19 | 136833304 | 136835354 | Ahy9g1903 | 9 | 105345090 | 105347036 | hybridization |