Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2314 ATGATCACACCAAGAGTTTCCGTCACAAAGAAGCGGCTGTTGCGGTGCGATGAAGAATTGAGTGCGGGTGAAGTTGTTATTCAAGAGCAAGAGGGGTCTAAGGGCGACGAAGTTACCGACGTCATTGGATTGATGAGCAAGGATGAGTTGGAATTAAGACAAGAGTTGCCAGATCATAGTGGAATCAGTGAAGAAGAAATCCCAGTCATAGAAATGAGTTTTGATTCGCTGCATTTAGCACAGGAGTTTTATGAAAATTATGCAAAGAAAGTGGGGTTCGTAATTAAAGTCAGGAACACAAACTTTGACAAGACGCGGAAGGAAGCAAAGATACCCATTAATCAATCTCTTCACTGCACTCGAGAGGGTTATCGGGAATCTCGGGTTAAGGCAGCAACTCGGGCAAACAGAATAACAACCACGAGATGCAGAGCAAGGATGTATGTCATGCTGGACAGGGAGAAGGAATCTAAGAAAGCCGTCCACTATCATGAGTATAGGGAGTTGACCATGCATGCTAAGTGCGTCATTACGGATAACGACGAGGCTGGCATAAGACCCAACAAGACGTATCTAGCATTGGCAAACGAGGGGATGATGAGTTATTTCGTTCGAATGAAGGAGATCAATCCCAACTTCTTTTATACCATAGATGTTGAAGATGCTAATAAATTTAGGAGCGCACTATGGGTAGATGCAAGGTGTAGGGCTTCGTATGAATATTACGGAGATGTGGTGTCGTTCGACACCACTTACAGAAGAAATAGGCATGGTCTATCTTTTGCATCCTTTGTCGGTGTAAACCACCATGGGAAGTCTACTCTTCTTGGCTATGCTTTACTTGGGAGCGAGGAGATCCCTAGTTTCGAGTGGGTGTTCACGCAGTGGGTGAGATGTGTCGGGACTGCGCCAAGGGGATCATCACTGACCAGTGCAAGGCGATGGCTGGTGCTATTAGGAAGGTCCTACCTGATACTGTCCACTGATGGTGCATCTGGCACATAA 1005 0.4577 MITPRVSVTKKRLLRCDEELSAGEVVIQEQEGSKGDEVTDVIGLMSKDELELRQELPDHSGISEEEIPVIEMSFDSLHLAQEFYENYAKKVGFVIKVRNTNFDKTRKEAKIPINQSLHCTREGYRESRVKAATRANRITTTRCRARMYVMLDREKESKKAVHYHEYRELTMHAKCVITDNDEAGIRPNKTYLALANEGMMSYFVRMKEINPNFFYTIDVEDANKFRSALWVDARCRASYEYYGDVVSFDTTYRRNRHGLSFASFVGVNHHGKSTLLGYALLGSEEIPSFEWVFTQWVRCVGTAPRGSSLTSARRWLVLLGRSYLILSTDGASGT* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2314 334 Pfam FAR1 DNA-binding domain 82 154 IPR004330 -
Ahy19g2314 334 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 180 304 - -
Ahy19g2314 334 Pfam MULE transposase domain 245 302 IPR018289 -
Ahy19g2314 334 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 180 304 IPR031052 GO:0006355
Ahy19g2314 334 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 150 IPR031052 GO:0006355
Ahy19g2314 334 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 59 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2314 Ahy-Chr19 136180540 136182291 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g2314 FAR1 2.20E-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2314 - - ahf:114925969 665.225