Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2296 ATGGAAACAAGTGCTCCAAATGTAAATGTCTTGAATTTTAGTTCTGCTTCTTTCTGTTGTGGAACGGACGAATGCGATTTTCGATGGATCGGAGGCTTTCGCCCTTCTAAAATTTTGCAGGTTATGTTGCCACAACTTGAAGATTCATGTAATTCCCAGGAACAAGTGTGTGATATTATAAAGTTTGGAAAATCATGTGAGGAAGCAGAATATGCTCTTTCACAAGGCATGGAAAAACTGCATCAACTGCATGCCAAAGCAACAGCAGCAGGTGACAAGGGATCTCAACTGATTTTTGTCTCTCAAATGGTTAGCTTTCTAAAGCAGGCTAATTATGTTCGTCAAGAATTCTTGCATCAATTCTCTCGTTTCGTTACAGTTTCCCAACAAGCTCAAATTTTACTTGCCTTGGGGATTAAGCTTTCCCAAGATATCTGA 438 0.395 METSAPNVNVLNFSSASFCCGTDECDFRWIGGFRPSKILQVMLPQLEDSCNSQEQVCDIIKFGKSCEEAEYALSQGMEKLHQLHAKATAAGDKGSQLIFVSQMVSFLKQANYVRQEFLHQFSRFVTVSQQAQILLALGIKLSQDI* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2296 145 ProSiteProfiles DOG1 domain profile. 1 145 IPR025422 GO:0006351|GO:0043565
Ahy19g2296 145 PANTHER FACTOR BZIP PROTEIN, PUTATIVE-RELATED 1 142 - -
Ahy19g2296 145 PANTHER TRANSCRIPTION FACTOR TGA9 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2296 Ahy-Chr19 135697943 135699546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2296 1 138 Calmodulin-binding Proteins AT5G10030 38.514 4.47e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2296 K14431 - aip:107617158 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2296 19 135697943 135699546 Ahy9g1871 9 104582622 104584886 hybridization