Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2295 ATGTTACCTTTATTCAAAAAGGCTGTGTTTGATGAGGATGAGGAAGATAAATACAAAGAAAGAAATTCGGGAAATAGTTTGAAGAGAGAAGAGAGTGGCGGTGGAGGAAAGTCAACCTTGGAAGAATTGATAAGGGAAGAGGAGAAGAAAAAGGAGAAAATCAACAGGAAGGACTATTGGTTGCGTGAGGGAATCATTGTTAAGGTTATGAGCAAGGCCTTGGCAGAGAAGGGTACTACCTTCAACAGAAAAATACTGAAGAAATATGATAAGGTTCATTATTCCAGGCAAGGACAAATGTTCAAGTCACAGGTCCAGAGTATGCACAAGGAAATTCTGCAAAGTCCTTGGCTTTGTGAGCTTATGGCCCTCCACATCAATCTAAGGGAAACTAAGGTCCAGTCTAGGAAGGCACATGCTTTCTTTGATGGATGTTCTCTAACGTTTAAGGATGGAAAACCAGCACTCACTTGTGAGCTACTTGATTCCATCAAAATTGATATCGACTTGACTTGTTCTATATGCCTGATTGCAGTCCCACTCTGCCAGAAATACTGGGAGAAAAGGGCTCAATCAGAAAGGGTAGAGAGGCTTAAACAGATAAAGGAACACTGGGAATCGCAATGCAGGTTATTCGTAGGTGTCTAA 648 0.4136 MLPLFKKAVFDEDEEDKYKERNSGNSLKREESGGGGKSTLEELIREEEKKKEKINRKDYWLREGIIVKVMSKALAEKGTTFNRKILKKYDKVHYSRQGQMFKSQVQSMHKEILQSPWLCELMALHINLRETKVQSRKAHAFFDGCSLTFKDGKPALTCELLDSIKIDIDLTCSICLIAVPLCQKYWEKRAQSERVERLKQIKEHWESQCRLFVGV* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2295 215 Pfam KN17 SH3-like C-terminal domain 56 77 IPR041330 -
Ahy19g2295 215 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 80 177 IPR033326 -
Ahy19g2295 215 MobiDBLite consensus disorder prediction 13 42 - -
Ahy19g2295 215 Coils Coil 37 57 - -
Ahy19g2295 215 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 182 215 IPR033326 -
Ahy19g2295 215 Coils Coil 188 208 - -
Ahy19g2295 215 MobiDBLite consensus disorder prediction 13 27 - -
Ahy19g2295 215 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 182 215 - -
Ahy19g2295 215 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 80 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2295 Ahy-Chr19 135694241 135695895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2295 7 88 C2H2 Transcription Factor Family AT1G55460 53.488 4.35e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2295 K16275 - gmx:100787904 219.935