Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2263 ATGAATCATTTCTATCTGTCAGTATTTTTTATCTCTGATTTAACTGTCTTAAGGATCTATCTATATATGAAGGATACATTTCCAAAGATAGAAATCTTCACACAAAAGGAATTACGAACTTGTTTGCAAGAAATGGCAATGGAATCAAAGTTTTTGGACAACGACAATGCAACCATAAGAAGTTCTCATCACTCTCTTACTGCTTCTCATCATGTTCATGCAAACTATTCAATGGAATCACCTGAAAGGCTTTTTTTGTGTTCACATTCAATGAAAGAAGAAGAGTTACTACCCTATGATGCCACTTTGATTGGCCATGTCCCTTCAAGTTTCCATGGCCATGAAGACACAGGAAATGGGCAAGAGAAAAACCATACCTTTCAAAAATTCAATAACAACCCTCTGAATCTATTGGAGACTCTGCCAGCATTAACCATAGCACCCTCTTCTTCTGATGACTCACCACCTTCTTTGACTTCTCCTCCTCCTTTGTCACACAAATTTCCAAACTTGACCTTGTTCTTGCAGGAAACTTCCATGCTCTACTCATCATCCCCGCATCTAAAAAGTGGTGAATCCATCTCGTCAAAATCTTCAAACTCCACATTTCCATTGTCGCAATTCCGCCAAACTCAGCGCCAAACAACCACCGCCGATCCACACAAAATAAGCAAGAATCTATCAAACATGAGGAGGTCCAAGTCTTTCAGTGACCACCACAATTGGTTGAGCACAAGGACACAACCTCTTAAGTGCGGCGGCGGAGATGGAAGAGTCAACAACAACAACAAGCTTTTCAAAGGGGTGAGACAAAGACACTGGGGAAAATGGGTTGCTGAGATAAGATTACCAAGAAACAGGACAAGGGTATGGTTAGGAACATTTGATACAGCTGAAGATGCAGCCATTGCATATGATACTGCAGCATATATACTAAGAGGAGATTATGCACAGTTGAATTTCCCTGAATTGAAGCATGTGATCAAGGCCAATTCTCTGAATGGAACCATTTCAGCACTCGTTGAGGCAAAACTACAAACAGTTCATCTGCATAAGAAGAATCCCAATAACAATAACAATAGCAACAAGAACAATTATGATGATTCACCACCATCAGCAGTTTCAGCATGCAAAAATAATGGCAATAAGGGTTCATCATCAAGCATAATGGAGTTGCAGTTTGAGGAAATCGAGAGAAGCAAAAGTCTTTCTCATCATCATGATCATCATCAAGTTTTGGATGTGGAAGGTGTTCAATTGAGCAGAATACCATCATTGGATATGGACCTTATTTGGGATGCACTTTTAGTCTCTGATTCATGA 1323 0.3976 MNHFYLSVFFISDLTVLRIYLYMKDTFPKIEIFTQKELRTCLQEMAMESKFLDNDNATIRSSHHSLTASHHVHANYSMESPERLFLCSHSMKEEELLPYDATLIGHVPSSFHGHEDTGNGQEKNHTFQKFNNNPLNLLETLPALTIAPSSSDDSPPSLTSPPPLSHKFPNLTLFLQETSMLYSSSPHLKSGESISSKSSNSTFPLSQFRQTQRQTTTADPHKISKNLSNMRRSKSFSDHHNWLSTRTQPLKCGGGDGRVNNNNKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGDYAQLNFPELKHVIKANSLNGTISALVEAKLQTVHLHKKNPNNNNNSNKNNYDDSPPSAVSACKNNGNKGSSSSIMELQFEEIERSKSLSHHHDHHQVLDVEGVQLSRIPSLDMDLIWDALLVSDS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2263 440 PRINTS Ethylene responsive element binding protein signature 288 304 IPR001471 GO:0003700|GO:0006355
Ahy19g2263 440 PRINTS Ethylene responsive element binding protein signature 266 277 IPR001471 GO:0003700|GO:0006355
Ahy19g2263 440 MobiDBLite consensus disorder prediction 185 233 - -
Ahy19g2263 440 SMART rav1_2 265 328 IPR001471 GO:0003700|GO:0006355
Ahy19g2263 440 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062 31 439 - -
Ahy19g2263 440 ProSiteProfiles AP2/ERF domain profile. 265 322 IPR001471 GO:0003700|GO:0006355
Ahy19g2263 440 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 31 439 - -
Ahy19g2263 440 CDD AP2 264 324 IPR001471 GO:0003700|GO:0006355
Ahy19g2263 440 Pfam AP2 domain 266 313 IPR001471 GO:0003700|GO:0006355
Ahy19g2263 440 Gene3D AP2/ERF domain 265 323 IPR036955 GO:0003700|GO:0006355
Ahy19g2263 440 SUPERFAMILY DNA-binding domain 265 322 IPR016177 GO:0003677
Ahy19g2263 440 MobiDBLite consensus disorder prediction 185 224 - -
Ahy19g2263 440 MobiDBLite consensus disorder prediction 146 165 - -
Ahy19g2263 440 MobiDBLite consensus disorder prediction 351 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2263 Ahy-Chr19 134731352 134732753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2263 134 435 AP2-EREBP Transcription Factor Family AT4G13620 43.092 4.50e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy19g2263 AP2 3.40E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2263 - - aip:107616692 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2263 19 134731352 134732753 Ahy9g1846 9 103993065 103994451 hybridization