Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2189 ATGTTGCAGGATGTGTTTGATCAGCCACTGCCACCAAAGGATGAAATTTCAAGCCCAATCAGTGCTAGACTTTTTGAGCTATGTGACTCTGATTTGTTCCCAGAAGCACTTCAAAACTCTGAGGTTACTTCAAGCTCAAATTGTTGCTATGAAGAGAACTCCTCATATGCAACAAACATGTCTCTAGCATTAGAAGTAGAAACCAAGTTCAATAATAATAACAATAACAATAATACAAATAGCAATAATAGCAATAACAGTGTCACCACCCCAAGTAGCACCACCACCACCAACAACAACACAACCAACAGTAGTAACCTGTCAATCATCTTTGACTCTCAAGAAGAGCTTGACAATGACATCTCTGCCTCCATAGATTTCTCATCTTCACCTGCAGCTTTCAATGTTCCACCGATGTTCTCAGTCACAACAAACCATCATCAAGAACAGTTTGATTTCTCTTCTATGCATCACCATCATCATCAGGTTCAGCAGCTAGCAGCATGTTCAGTTGTGGAGGGCTTCTCACAGTATCCCACTGACACTAGTGCTGTTGCACCTCCTCCTCCTCCTCTCATGGGGGCTCCTCAATTGCCTTCTGTCTTTGAAGAGGATTGCATTTCTTCTGCTGTTCCTTCTTATGTCACTCTCAACCCTTCTTCTCCTTCTTGCTCTTATCTCAACCCTGCTGCCATTCCACCACCTTACATGCCTCCTGCTGGTCCCCTGGCCACCGCCTTGTCGGCCGACCGTGCCGCTTTGTTCACCGGAAGCATGCTTCTTGGCTCTGAGCTTCAGAGACCAGACCTTGAATACCAAGGCGAAAATGGTGGAATTTATTGTACAGATTCAATTCACAGAGTGTTTAACCCTCAAGAGCTTCAGGCACTTAGTACTGAGAGTCAGCAACTAGTGGCTGGAGGTGGGAGTTCTGCCAACTTAACGCCAGAAATCTCAAACTTGGAGGACTCTAGCTTCAAGGTTGGGAAACTCTCTGTCGAGCAAAGAAAAGAAAAGATTCATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATCAAGTATGCCTGCCGCAAAACTCTGGCAGATAGCCGGCCGCGAGTTCGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGATACTCAGAGACCTGCAAGTAGCAATCATGAGGAAGAAGATGAAGAAGAAGTAGTTGTGAAAGAAGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1305 0.4398 MLQDVFDQPLPPKDEISSPISARLFELCDSDLFPEALQNSEVTSSSNCCYEENSSYATNMSLALEVETKFNNNNNNNNTNSNNSNNSVTTPSSTTTTNNNTTNSSNLSIIFDSQEELDNDISASIDFSSSPAAFNVPPMFSVTTNHHQEQFDFSSMHHHHHQVQQLAACSVVEGFSQYPTDTSAVAPPPPPLMGAPQLPSVFEEDCISSAVPSYVTLNPSSPSCSYLNPAAIPPPYMPPAGPLATALSADRAALFTGSMLLGSELQRPDLEYQGENGGIYCTDSIHRVFNPQELQALSTESQQLVAGGGSSANLTPEISNLEDSSFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTQRPASSNHEEEDEEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2189 434 ProSiteProfiles CCT domain profile. 336 378 IPR010402 GO:0005515
Ahy19g2189 434 PANTHER CCT MOTIF FAMILY PROTEIN 13 434 - -
Ahy19g2189 434 Coils Coil 434 434 - -
Ahy19g2189 434 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 13 434 - -
Ahy19g2189 434 Pfam CCT motif 336 378 IPR010402 GO:0005515
Ahy19g2189 434 MobiDBLite consensus disorder prediction 371 403 - -
Ahy19g2189 434 MobiDBLite consensus disorder prediction 371 393 - -
Ahy19g2189 434 MobiDBLite consensus disorder prediction 70 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2189 Ahy-Chr19 131787640 131792573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2189 308 380 C2C2-CO-like Transcription Factor Family AT5G24930 38.462 4.42e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy19g2189 CCT 5.80E-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2189 - - aprc:113871720 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2189 19 131787640 131792573 Ahy19g2189 19 131787640 131792573 ECH
Ahy19g2189 19 131787640 131792573 Ahy9g1778 9 101722772 101727722 hybridization