Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2146 ATGAGAATTGAAGCTGCTTGGTTGTTGATCATCATAGAAAAAAACCTAGCTAGAAAGCTGGCTAATCCTTGGTGGACCGGAACCCAGGTGGGGTTATCTGGGGTTGACCCAGGAAGCCATTCACCTGGCTTAAGCAGCAAGGGGCACACCGACAGAGCCCCCACAGTTGAAGATGAAGATAATAGGGATAACGGATCAGATGAACCAAGAGAAGGTGCAGTCGAAGTTGGAACCCGAAGACCCCGAGGTAGGCCTCCAGGTTCCAAGAACAAGCCTAAACCACCCATCTTCGTCACAAGGGATAGCCCCAATGCCCTCCGGAGCCACGTCATGGAGATAGCAGGTGGTGCTGATGTGGCGGAGAGCGTGGCGCAGTTCGCCAGGAGGCGACAACGCGGAGTTTGTGTGCTCAGTGGGAGTGGATCGGTTGCCAATGTTACCATCCGACAACCTACGGCGCCTGGCGCCGTAGTCCTTCATGGAAGGTTCGAGATCTTATCTTTAACAGGAGCATTTTTACCTGGCCCTGCCCCTCCTGGGTCCACGGGTTTAACCGTGTATCTGGCCGGTGGACAAGGTCAGGTTATTGGAGGGAGTGTTGTTGGGTCACTCGTAGCTGTTGGGCCTGTTATGGTCATTGCGGCCACATTTGCTAATGCTACCTATGAGAGGCTCCCACTTGATGAGGAAGATGAAGGGCCTAGCGGTGGTGGTGGTGGTGGTAGCAGTGGTGGTACTGGAGGAGGCGCAGGTGGTGGTGGTTCTCCACCACCACAACCTCTTCCAGGGATTGGAGGTAGTGGAGGCCATCATTCGCTACACGGGGGTGGTGGCCTTCCCGATCCAACATCACTCCCTTTGTATAACATGCCACCTAATTTGATGCCTAATGGAGGGCAGGTAGGGCATGAGGCTTATCCTTGGCCTCATGGACGACCACCTTATTGA 948 0.5443 MRIEAAWLLIIIEKNLARKLANPWWTGTQVGLSGVDPGSHSPGLSSKGHTDRAPTVEDEDNRDNGSDEPREGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEIAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTIRQPTAPGAVVLHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVIGGSVVGSLVAVGPVMVIAATFANATYERLPLDEEDEGPSGGGGGGSSGGTGGGAGGGGSPPPQPLPGIGGSGGHHSLHGGGGLPDPTSLPLYNMPPNLMPNGGQVGHEAYPWPHGRPPY* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2146 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 54 315 IPR014476 GO:0003680
Ahy19g2146 315 ProSiteProfiles PPC domain profile profile. 103 239 IPR005175 -
Ahy19g2146 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 54 315 - -
Ahy19g2146 315 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 218 IPR005175 -
Ahy19g2146 315 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 230 - -
Ahy19g2146 315 MobiDBLite consensus disorder prediction 33 48 - -
Ahy19g2146 315 MobiDBLite consensus disorder prediction 227 315 - -
Ahy19g2146 315 CDD DUF296 107 217 IPR005175 -
Ahy19g2146 315 MobiDBLite consensus disorder prediction 33 102 - -
Ahy19g2146 315 MobiDBLite consensus disorder prediction 51 78 - -
Ahy19g2146 315 Gene3D - 106 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2146 Ahy-Chr19 129151239 129152616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2146 20 315 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.714 3.27e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2146 - - ahf:112778740 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2146 19 129151239 129152616 Ahy19g2146 19 129151239 129152616 ECH
Ahy19g2146 19 129151239 129152616 Ahy9g1743 9 98446455 98448591 hybridization