Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2127 ATGATTGCATTGGAATTAACTTCAAAAGATCTTACAGTGCGATGTGCATTGTTTGGGGATTATGTTAATCAAGTAAATCATTTCCTTGCCTCTGGCTATGTGGAGCAGCCTGTTGTAGTCATTCAACTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGTCTTCAAAATGTGATGTATGCCACTCAAATGTTATTTAATCCTAATATTCCTGAAGTTGTTGAATTCAGGCGAGGTGTCAATGGTACCCAGCCACTGTTTATTGCAAATGAGGGTAAAGTTCTCTCCTTGGAAGATGATTTCATGCGTTTAACTAGAAAATGCACAATTGAAGAGCTTCAAGATAACAATCAGGAGGGTTCTTTTATCATTTTTGGTGCAATCCAAGGTATTGTTGAGGATGGAAGTTGGTGGTATTCTGCTTGTGTGTGTGGAAAGGGTATCTATCCTCAAAATGGTGCATATTACTGTGATTTTTGTTTGAAGCACATAACTAATGTCACTCCAAGATTTAAAATTAAAATAACAGTTGAAGATCATACTGGGGAGGGTATTTTCCTTCTCTTTGATCGTGTGGCTTCTTATTTGCTTAAGAAATCATGTGCTTACTTGTTTACTGAGGTTCAAAGAGATGCAAGTCTTATATGTGGGGATACTTATCCTCCCATATTCCAAGGGCTCATTGGAAAGAAGTTGCTGCTCAAGGTTGATACCAAAGGTGTCCCACATGATACATTTTATGGAACTTTCTGA 753 0.3785 MIALELTSKDLTVRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQMLFNPNIPEVVEFRRGVNGTQPLFIANEGKVLSLEDDFMRLTRKCTIEELQDNNQEGSFIIFGAIQGIVEDGSWWYSACVCGKGIYPQNGAYYCDFCLKHITNVTPRFKIKITVEDHTGEGIFLLFDRVASYLLKKSCAYLFTEVQRDASLICGDTYPPIFQGLIGKKLLLKVDTKGVPHDTFYGTF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2127 250 Pfam Replication factor-A C terminal domain 126 208 IPR013955 -
Ahy19g2127 250 SUPERFAMILY Nucleic acid-binding proteins 107 236 IPR012340 -
Ahy19g2127 250 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 9 205 - -
Ahy19g2127 250 CDD RPA1_DBD_C 110 239 IPR013955 -
Ahy19g2127 250 Gene3D - 2 84 IPR012340 -
Ahy19g2127 250 CDD RPA1_DBD_B_like 10 78 - -
Ahy19g2127 250 PANTHER REPLICATION FACTOR A 1, RFA1 9 205 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy19g2127 250 SUPERFAMILY Nucleic acid-binding proteins 11 80 IPR012340 -
Ahy19g2127 250 Gene3D - 98 246 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2127 Ahy-Chr19 127953186 127954587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2127 12 197 Core DNA Replication Machinery Family AT5G08020 23.858 1.13e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2127 - - adu:107471135 487.263