Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2120 ATGCAAAACCAAAGCAAAGCAAAACAAACAAAACACATAACCATGAATGAAGATGGATCAAAGGGTAGGACAAAGGATGACGGCGGAGATATCCGATATAGAGGCGTACGCCGCCGTCCTTGGGGGAAGTTTGCGGCCGAGATTCGTGACTCCACTAGGCAGGGTCAGAGGGTTTGGCTTGGGACATTCAACACGGCTGAGGAAGCAGCTAGGGCTTATGATAGAGCCGCTTATGCCATGAGAGGTGCATTTGCTATCCTTAACTTCCCAAATGAGTATCCTATGTCATCAGGTTATGGTAATAACCGCACCGGTGGCGGTGGCAGTGGCTCCTCTTATTCCTCCGGCGCTTCAACTTCCTCTGCTTCATGGCAGGGCAATGTGGAAGGCAGGGGAAGGAGTGAAGTCTTTGAGTTTGAGTACTTGGATGACAAATTGTTGGAGGAGCTTCTTGCATGCGAAGAAAAGAAGAAAAATGGACCATGA 486 0.4897 MQNQSKAKQTKHITMNEDGSKGRTKDDGGDIRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYAMRGAFAILNFPNEYPMSSGYGNNRTGGGGSGSSYSSGASTSSASWQGNVEGRGRSEVFEFEYLDDKLLEELLACEEKKKNGP* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2120 161 MobiDBLite consensus disorder prediction 11 34 - -
Ahy19g2120 161 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Ahy19g2120 161 ProSiteProfiles AP2/ERF domain profile. 32 90 IPR001471 GO:0003700|GO:0006355
Ahy19g2120 161 Gene3D AP2/ERF domain 31 91 IPR036955 GO:0003700|GO:0006355
Ahy19g2120 161 PANTHER DNA-BINDING DOMAIN 25 152 IPR044808 GO:0003700|GO:0009873
Ahy19g2120 161 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Ahy19g2120 161 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Ahy19g2120 161 CDD AP2 32 91 IPR001471 GO:0003700|GO:0006355
Ahy19g2120 161 SMART rav1_2 32 96 IPR001471 GO:0003700|GO:0006355
Ahy19g2120 161 PANTHER - 25 152 - -
Ahy19g2120 161 MobiDBLite consensus disorder prediction 95 128 - -
Ahy19g2120 161 MobiDBLite consensus disorder prediction 1 34 - -
Ahy19g2120 161 Pfam AP2 domain 32 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2120 Ahy-Chr19 127675398 127675930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2120 27 158 AP2-EREBP Transcription Factor Family AT3G23230 60.150 7.26e-44 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy19g2120 AP2 6.70E-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2120 19 127675398 127675930 Ahy19g2120 19 127675398 127675930 ECH
Ahy19g2120 19 127675398 127675930 Ahy9g1722 9 97646382 97646991 hybridization