Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2119 ATGGAGGACCACCACAGGGGGAAACAAGGAAAGGAGGAGAAGGGAAAGGAAGAGGTCAAGTTCCGAGGTGTGCGGCGGCGGCCATGGGGAAAGTATGCTGCTGAGATAAGGGATCCGTCCAAGCAAGGGACAAGGTTGTGGCTGGGGACATTTGACACAGCTGAGGACGCGGCTAGAGCTTATGATCGTGCAGCCTTCAATCTTAGGGGTCACCTTGCAATTCTCAATTTCCCAAATGAGTATTATTCTCAAATAAGGGGTTCACCACCATATCCACCATATTTAGCATCACCCTCTTCTTCTTCTTCTTCTTATTCACCTCAATGCCATGCTAGTGGAAGTTCTAATCCTGGTTCCAACCATGGTCCTCCTTTTGAGATTGAGTACTATGATAATAAACTGTTGGAGGATCTTCTTGAGTCTGAAGAGCTGAACAAGAAAAAGAAGGGAAAATGA 456 0.4671 MEDHHRGKQGKEEKGKEEVKFRGVRRRPWGKYAAEIRDPSKQGTRLWLGTFDTAEDAARAYDRAAFNLRGHLAILNFPNEYYSQIRGSPPYPPYLASPSSSSSSYSPQCHASGSSNPGSNHGPPFEIEYYDNKLLEDLLESEELNKKKKGK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2119 151 PANTHER ETHYLENE RESPONSE FACTOR 1 143 - -
Ahy19g2119 151 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
Ahy19g2119 151 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Ahy19g2119 151 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Ahy19g2119 151 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Ahy19g2119 151 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Ahy19g2119 151 MobiDBLite consensus disorder prediction 88 126 - -
Ahy19g2119 151 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Ahy19g2119 151 MobiDBLite consensus disorder prediction 97 121 - -
Ahy19g2119 151 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Ahy19g2119 151 PANTHER DNA-BINDING DOMAIN 1 143 IPR044808 GO:0003700|GO:0009873
Ahy19g2119 151 MobiDBLite consensus disorder prediction 1 22 - -
Ahy19g2119 151 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2119 Ahy-Chr19 127605734 127606659 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2119 18 143 AP2-EREBP Transcription Factor Family AT3G23230 61.111 1.19e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy19g2119 AP2 2.60E-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2119 - - gmx:100776376 142.124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2119 19 127605734 127606659 Ahy19g2119 19 127605734 127606659 ECH
Ahy19g2119 19 127605734 127606659 Ahy9g1720 9 97539611 97540421 hybridization