Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2072 ATGAATTCATCAGAAGTTGAAGAAGAAGAAGAAGCACAAGATCATCATGGAAGCAAAAAGTCTTATGATTGCACATTCTGCAGAAGAGGCTTCACAAATGCTCAAGCTTTAGGGGGTCACATGAATATTCATAGAAAAGATAGGGCCAAGAACAAGCCTCATCTTCTTCATCACTCACCAAGTACTAGCAACAATAATCATCAAGTGGGAGAATTCATGTCCCTAAAATTCTCATCATCATCAACCCATGCTTACTCTTACTCCGCTTTCGATTCTCAAAGGACCTATGACAACATGTATTTTCATCCACCTCCACCACCACCACCTAATGATTATCAAATTAGGAACCATCAGCAACATGAACCACCATTTCAATTAGATCAATTTCATCATCAGCCTATGATGAATCTCAAGAATCAAGAGCTTCAAGGTGCCAATTTGAGTCTACAAATTTGCCCTACTAGTGATGATGAACATGTTATTAGAAGAAGAATTCACCAGCAAGATAGTGATGAAGTGGACTTGGAACTCAGACTCGGCCACCATGATCCATAA 555 0.3928 MNSSEVEEEEEAQDHHGSKKSYDCTFCRRGFTNAQALGGHMNIHRKDRAKNKPHLLHHSPSTSNNNHQVGEFMSLKFSSSSTHAYSYSAFDSQRTYDNMYFHPPPPPPPNDYQIRNHQQHEPPFQLDQFHHQPMMNLKNQELQGANLSLQICPTSDDEHVIRRRIHQQDSDEVDLELRLGHHDP* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2072 184 SUPERFAMILY beta-beta-alpha zinc fingers 19 48 IPR036236 -
Ahy19g2072 184 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 3 182 - -
Ahy19g2072 184 MobiDBLite consensus disorder prediction 1 20 - -
Ahy19g2072 184 ProSitePatterns Zinc finger C2H2 type domain signature. 24 44 IPR013087 -
Ahy19g2072 184 PANTHER OS07G0101800 PROTEIN 3 182 - -
Ahy19g2072 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 49 IPR013087 -
Ahy19g2072 184 Gene3D Classic Zinc Finger 4 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2072 Ahy-Chr19 124430363 124430917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2072 20 184 C2H2 Transcription Factor Family AT4G17810 31.325 5.67e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy19g2072 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2072 - - aip:107615854 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2072 19 124430363 124430917 Ahy9g1680 9 94663893 94664438 hybridization