Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2063 ATGCCTTTTCTATTATTGAAAAGCTACTTTTTCTATTTTTACCCCTTCTTTTTTCATTTACCTTCAAGTTGTTCTTTTTCATGTTCTACAATCTTTCTATCTGTCTATGTTTCTGACAAACAAGGTTTTCTTCCCTTCAACTCTAGGAAAGGGCCAAGTCATCAAGTTCAATGTTGTGGAAGAATGAGAGTTATTAGGAATTGGATTGTAAGTAAGAAGAGAAAGTTCCTTGGGATTGAGGAGAGATTGGAGAAGATGATCAATTGCATGCGTTCTGGGGAACAGGTTGCTGTTGATGAGATTGGTGGTTATTCATCAGAGTCACTTGCAACAAGGGACTATTCAGCTACAGCGAGTGGCTATTCATCTAGGCCTGGTGCTGCTGAATTTGATCCAAAGTTGGATAATAGCAACATTGAAGAAGCAGAGTCCACACTTCGTGAAAGTGGTTACTTGAACTATGAGGAAGCTAGAGCTTTACTAGGAAGGCTTGAATATCAGAAGGGTAATTTTGAAGCTGCACTTCATGTATTTGAAGGAATAGACATTGCTGCTGTTGCTCCAAAGATGAAAATTTCTATATCTAGAAGATGTGAACGGAATATGAATAGACGCCGTTCGCTCAGTGATGCAGCGCCTCCTATGTCCATTCATGCTGTTAGTCTACTTCTTGAAGCTGTTTTGCTCAAGGCAAAGTCATTGCAGATTCTTGGAAGGTTTCAAGAAGCTGCTAGATCATGCAAGACTATTTTGGACACTGTTGAATCTGCATTACCTGAAGGATGGCCAGAGAACGTTGATTTAGACAGAAAGTTACAAGAGACTATAAGAAATGCTGTAGAACTACTTCCAGAGCTATGGAACCTTGCCGGCTCTCATCAACATGTCATATCATCATTTAGGAGGGCCTTGCTTTATCCATGGAATCTTGACATTGAAACAACTTCAAGAATTCAAAAGGAATTTGCTATGTTTCTTCTGTATAGCGGCTGTGAAGCGAGTCCTCCTTCGCTTCGCTCTCAATTGGACGGTTCCTTTGTCCCACGAAACAATATAGAAGAGGCTGTTCTCTTGCTTCTTATTCTGCTGAGAAATTCTGTTATAGGAAGCATTGAATGGGACCCTTCAGTAGTTGATCATCTTTCTTTTGCTCTAACTGTTTCCGGGGAGTTCAAGACACTGGCTCAACAGGTTGAGGAATTGCTTCCGGAAACCATGGAGAGGAAAGAAAGACATTATATTCTAGCACTTTGTTACTTTGGTGAAGGTGAGCACATGATTGCTTTGGATCTTTTGAGGAACTCTTTGAATGATAGAGAGAACTCGGAGTGCGAACAGGAACTGCTTCTAGCTTCAAAAATTTGTGCAGATAACATGGTTTGTGTTGAGGATGGAATCAAATATTCTTGCAAAGCAATTTCTCATTTGGATGGAAAGTGCATGCAAGTGGTAGCAATTGCATATTGCTTACTAGGTGTTCTGCTCTCATCGAAATCAAGGTTGATAGCTTCTGATTCAGAGAAAGTTTTAATGCAATCCGAAGCACTGAGGGCTCTGAAAACGGCCGAGAGAACGATGAGTGAGAGTGATCCTTACATAGTCCTTCATCTTTGTCTAGAATACGCCGAGCAGCGGAACTTGAGCGTTGCTTTTTGTCATGCAAAGGAACTGGTTAAGCTTGAGGGTGGATCTAGTGTTGCTGCATATGTATTACTTGCAAGGATTTTATCAGCTCAAAAGAATTTTGTGGATGCAGAGTTGGTTATTGATGCTGCCATAGATCAAAGTGGGAAATGGGATCAAGGAGAGTTGTTGAAAACCAAAGCGAAACTCCGGATTGCACAGGGAAGATTAAGGAGTGCAGTGGAGACATATACTTTCCTCCTTGCTGTGCTTCAAGTCCAAAACAAAAGTTTGGGCACTGCAAATAAGGTTATGAAGAAAATTTTATGGCATCTCTTATTCTGTGTTGTACAGAGTAAGAGAAACCGCAACAGAAATCTGGAGATGGAAATATGGCATGATTTGGCCAACTTGTACATAGCTTTATCACAATGGCGAGATGCTGAAGTTTGTCTTGCAAAGTCTAAGGCTATTAATCCTTATTCTGCTTCTAGATGGCACTCCACAGGTTTACTTTTCAAGGCCAGAGATCAGCAGCAAGAAGCATTGAATGCATTTAGGAAAGCACTAGACATCGAACCAAACCATGTGCCAAGTTTGATATCAACAGCATGTGTTCTGAGAAAGCTTGGTGGCCAATCATCTTCAATTGTGAGAAGCCTTCTGAGTGATGCACTAAGGCTTGACAGAACAAACCCAAATGCTTGGTACAATCTTGGACTGCTCTACAAACATGATTTGGGCTCATCTGCATTGGAAGCTGCTGAGTGCTTTGAGGCTGCTGCTCATCTTGAAGAAACTTCTCCCATTGAACCCTTTAGATAG 2448 0.4109 MPFLLLKSYFFYFYPFFFHLPSSCSFSCSTIFLSVYVSDKQGFLPFNSRKGPSHQVQCCGRMRVIRNWIVSKKRKFLGIEERLEKMINCMRSGEQVAVDEIGGYSSESLATRDYSATASGYSSRPGAAEFDPKLDNSNIEEAESTLRESGYLNYEEARALLGRLEYQKGNFEAALHVFEGIDIAAVAPKMKISISRRCERNMNRRRSLSDAAPPMSIHAVSLLLEAVLLKAKSLQILGRFQEAARSCKTILDTVESALPEGWPENVDLDRKLQETIRNAVELLPELWNLAGSHQHVISSFRRALLYPWNLDIETTSRIQKEFAMFLLYSGCEASPPSLRSQLDGSFVPRNNIEEAVLLLLILLRNSVIGSIEWDPSVVDHLSFALTVSGEFKTLAQQVEELLPETMERKERHYILALCYFGEGEHMIALDLLRNSLNDRENSECEQELLLASKICADNMVCVEDGIKYSCKAISHLDGKCMQVVAIAYCLLGVLLSSKSRLIASDSEKVLMQSEALRALKTAERTMSESDPYIVLHLCLEYAEQRNLSVAFCHAKELVKLEGGSSVAAYVLLARILSAQKNFVDAELVIDAAIDQSGKWDQGELLKTKAKLRIAQGRLRSAVETYTFLLAVLQVQNKSLGTANKVMKKILWHLLFCVVQSKRNRNRNLEMEIWHDLANLYIALSQWRDAEVCLAKSKAINPYSASRWHSTGLLFKARDQQQEALNAFRKALDIEPNHVPSLISTACVLRKLGGQSSSIVRSLLSDALRLDRTNPNAWYNLGLLYKHDLGSSALEAAECFEAAAHLEETSPIEPFR* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2063 815 SUPERFAMILY TPR-like 410 630 IPR011990 GO:0005515
Ahy19g2063 815 Gene3D Tetratricopeptide repeat domain 349 653 IPR011990 GO:0005515
Ahy19g2063 815 ProSiteProfiles TPR repeat profile. 704 737 IPR019734 GO:0005515
Ahy19g2063 815 SMART tpr_5 224 257 IPR019734 GO:0005515
Ahy19g2063 815 SMART tpr_5 774 809 IPR019734 GO:0005515
Ahy19g2063 815 SMART tpr_5 566 599 IPR019734 GO:0005515
Ahy19g2063 815 SMART tpr_5 670 703 IPR019734 GO:0005515
Ahy19g2063 815 SMART tpr_5 704 737 IPR019734 GO:0005515
Ahy19g2063 815 Gene3D Tetratricopeptide repeat domain 658 811 IPR011990 GO:0005515
Ahy19g2063 815 PANTHER OS10G0471400 PROTEIN 78 815 - -
Ahy19g2063 815 SUPERFAMILY TPR-like 603 785 IPR011990 GO:0005515
Ahy19g2063 815 PANTHER PROTEIN NPG1 78 815 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2063 Ahy-Chr19 123922878 123927852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2063 87 815 Calmodulin-binding Proteins AT4G28600 51.973 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2063 K21843 - gmx:100789469 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2063 19 123922878 123927852 Ahy19g2063 19 123922878 123927852 ECH
Ahy19g2063 19 123922878 123927852 Ahy9g1674 9 94098936 94103841 hybridization