Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2048 ATGGGATTCAAATATCTTCCTCTCAAGCTTAAGGTTTTCCGGCTGAAACGGTTTCTGCTAGGCCGCGGCCGAAGAGGAGTAAAGAGAAAGCATGTGATGGTGCCTGCAAAGAAGCCTTCATGGATGATGCCAATAACACATGGATATTATGTGGTGGAGCATCATCAAGGTTCTGAAAAAGACCTTTTGAACTTTGATTCAGTAGTGGTGCAAAGAGAGCAAATGGATCATAATGAATTGTGGTATTTCGGAATGTTTGACGTTGTAGTTGGAGATGTGGTTACCAAGTACATTCAATCCAATTTCTTTAACAAGAAGCTTCAAGAGTCTCATTTAAGGAGGAAAAGCAAGGAAACGCTGAAGAGGGCATACCTTGGTGCAAGGGCAAAGATAAGAGAGGAGTATGAATCAGATGAAAGAAGCAGAATGGGTTCAGGATCATGTGTTATGGTGATCAATGGAGAGAAGCTTGTGATAGCAAACATGGGAGATTATAAAACTGTTGTCTGCAGAGATGGCATAGCTCATCATCACACATCATCTGGTAGACACCACCAACATTCACCACGAATACATTGGTCTCGCAGACTCTTCTCCGGTAAAAGTCATTCTAGAGGCTCAGAACTTGTTGTGAAAGGAGAAAGGATTGATTCAGATACTGAATTTCTGATAATGGCCAGCAATGGTATATGGGAGGTGATGCAGAATCAAGAGGCAGTGAATCTGATAAGTCACATAGAGGATCCCCAAGAAGCAGCGGAATTCTTGGCAAAGGAAGCTATGAATAGGATGAGCAAAAGCAACATCTCATGCTTAATCATTCGCTTTGAGTGA 834 0.4209 MGFKYLPLKLKVFRLKRFLLGRGRRGVKRKHVMVPAKKPSWMMPITHGYYVVEHHQGSEKDLLNFDSVVVQREQMDHNELWYFGMFDVVVGDVVTKYIQSNFFNKKLQESHLRRKSKETLKRAYLGARAKIREEYESDERSRMGSGSCVMVINGEKLVIANMGDYKTVVCRDGIAHHHTSSGRHHQHSPRIHWSRRLFSGKSHSRGSELVVKGERIDSDTEFLIMASNGIWEVMQNQEAVNLISHIEDPQEAAEFLAKEAMNRMSKSNISCLIIRFE* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2048 277 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 276 - -
Ahy19g2048 277 CDD PP2Cc 64 276 IPR001932 -
Ahy19g2048 277 SUPERFAMILY PP2C-like 44 276 IPR036457 -
Ahy19g2048 277 ProSiteProfiles PPM-type phosphatase domain profile. 64 276 IPR001932 -
Ahy19g2048 277 PANTHER ALPHABET, ISOFORM E-RELATED 6 276 - -
Ahy19g2048 277 SMART PP2C_4 45 274 IPR001932 -
Ahy19g2048 277 Gene3D - 45 277 IPR036457 -
Ahy19g2048 277 Pfam Protein phosphatase 2C 215 269 IPR001932 -
Ahy19g2048 277 Pfam Protein phosphatase 2C 74 186 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2048 Ahy-Chr19 122598477 122600298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2048 1 276 PP2C-type Phosphatase Gene Family AT3G23360 46.316 1.43e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2048 K19704 - gmx:100794054 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2048 19 122598477 122600298 Ahy19g2048 19 122598477 122600298 ECH
Ahy19g2048 19 122598477 122600298 Ahy9g1660 9 92630160 92631950 hybridization