Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1949 ATGCAAAGTGATAATTATAATCCAAGAATGATGATAAAGAAGAGAAAGAGTTGCTGCTTGCATTTGAGATTGAGAAGTGGAGCGGAATGCGATTCTTGTGATCAAGAAAATTATGATTCTTTCACTTGCTTATCAATGGCGGTGGATGCATGTCGTGAACAAACCTCTTCATGTTTGGAGAGAATCAAGAAGAGAAAAAGGGAAGAAAACAAGAAACCGTCGTTTTCATGGGGATGTTCAACTGAGCTAATGATGTATGACGATCCATGGAAGCTGAAGAAGGTGCTGAACAGCAGCGACGTGGGGAGCTTGAGTAGGCTGTTGCTTCCGAAGGAGATGGCGGAGCCGCTGGTGGCAGCGGTGTTGGGGTACGACGAGAACCAGAAAGAAGGAATGGAGGTCGAGATATGGGACGTTGACACACAGTCAATGCACAGTCTTGTGTTCAAGAGATGGGGTTCTTCTAGAAGCTATGTCTTCATGGCCAATTGGATTAAAGACTTTGTCAAAAGAAGGTCTCTCAAGTCCGGCCATGAGGTTGGTTTCCACTGGGATCCTTATGCCAACCGCTTTGATTTCTCTGTTCTCAAGGCTGCTACAGAGGAGGATTTCTCAAACTGA 621 0.4509 MQSDNYNPRMMIKKRKSCCLHLRLRSGAECDSCDQENYDSFTCLSMAVDACREQTSSCLERIKKRKREENKKPSFSWGCSTELMMYDDPWKLKKVLNSSDVGSLSRLLLPKEMAEPLVAAVLGYDENQKEGMEVEIWDVDTQSMHSLVFKRWGSSRSYVFMANWIKDFVKRRSLKSGHEVGFHWDPYANRFDFSVLKAATEEDFSN* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1949 206 CDD B3_DNA 90 197 IPR003340 GO:0003677
Ahy19g1949 206 Gene3D - 89 202 IPR015300 -
Ahy19g1949 206 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 43 198 - -
Ahy19g1949 206 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 43 198 - -
Ahy19g1949 206 SUPERFAMILY DNA-binding pseudobarrel domain 88 193 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1949 Ahy-Chr19 114193039 114193802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1949 88 203 B3 DNA Binding Superfamily AT3G26790 30.833 5.95e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1949 - - adu:107466113 400.593