Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1947 ATGCAGTTCCAAAGAAGTGGAATACTCACTACACTTTGCGATCACTCCTTTCAATGCCCTTGTGTTTCAAAGTGGACATACTTGTCTTGCCCGATTTTGGATGAATACAACTGTCTTCTAACATCTCAGTTGGAAACTCAAAGACAAAACATACTTCATGATTCGGATGACGAAGAATGCTTGAAGATATTAAAGAATTGCTGGAAGGCTATACACCGAATGATGGGGTGGACAAAGTTCTTCCTGCAGTGCCAGAGCAGACAGATGTTGCTAAGATGGCTTTCAGGTCTGATGTTTTCATGA 303 0.4125 MQFQRSGILTTLCDHSFQCPCVSKWTYLSCPILDEYNCLLTSQLETQRQNILHDSDDEECLKILKNCWKAIHRMMGWTKFFLQCQSRQMLLRWLSGLMFS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1947 100 Gene3D Vaccinia Virus protein VP39 50 72 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1947 Ahy-Chr19 114054904 114056974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1947 49 71 Monolignol Biosynthesis Gene Families AT1G21110 65.217 3.95e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1947 K10632 - aip:107621993 180.259