Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1929 ATGCCTCCTCCATTTGATTCTATCTCTAAGATCCACCCTCCAAGGGAGGCATGGAGACTCAAAGTTAGGGTACTAAGAACTTGGATTGTTCCTTCTTTTGGAAATCATGATGTTGCAAATTCAATGGAAATTGTTCTTGTTGATGGAGATTCTAACAAAATACAAGCAACTGTTAAGAAGCAGCTCATAAATAGGTTTAAAGAGAGTATTATTGAGGGTCAAACATACCGAATGTCATATTTTAGTGTTGTTCCAAACCAAGGCAATTATAGGGCATCAGAACATGAGTTTAAGTTGGTTTTTCTTAACCGTACAACTGTTATTCCTGTCCCTAACGATGCTATCCCAAAGACATGTTTCAGTTTCTGTTCGTTTGATGAGCTCTTGAAAATGACTGAAGATTACGTTTACTTAGTTGGTCGGTGA 426 0.3756 MPPPFDSISKIHPPREAWRLKVRVLRTWIVPSFGNHDVANSMEIVLVDGDSNKIQATVKKQLINRFKESIIEGQTYRMSYFSVVPNQGNYRASEHEFKLVFLNRTTVIPVPNDAIPKTCFSFCSFDELLKMTEDYVYLVGR* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1929 141 Pfam Domain of unknown function DUF223 43 132 IPR003871 -
Ahy19g1929 141 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 41 130 - -
Ahy19g1929 141 SUPERFAMILY Nucleic acid-binding proteins 3 113 IPR012340 -
Ahy19g1929 141 CDD RPA1_DBD_A_like 19 107 - -
Ahy19g1929 141 PANTHER DNA BINDING PROTEIN-LIKE 41 130 - -
Ahy19g1929 141 Gene3D - 4 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1929 Ahy-Chr19 112074783 112075331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1929 2 139 Core DNA Replication Machinery Family AT5G45400 24.306 1.11e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1929 - - ahf:112778621 291.197