Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1895 ATGGATGTTTCTGCTAAAAATATGATATTTGGTATGGCTGGGATTGATCCTGAAAGAAGACCAAAGCTAATCAAGGTACTTGGTGTAGAGAGAACAGCATCACAACAGGAAATAAAGAAGGCTTATTACAAGTTAGCATTGAGGCTGCATCCTGACAAGAATCCTGGTGATGAGGAGGCTAAAGCAAAATTTCAGCAACTGCAAAATGTTATCTCAATTCTTGGGGATGAAGAAAAGCAAGCCATTTATGATCAGATTGGTTGTGTTGATGATGCTGACCTTGCCAGGGATGTTGTCCAGAATCTTCACAACTACTTTAAAACAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCAGAGAAAAATGATTTGATTGATTTGTACAAAAAGTGCAGAAGTGTTTGTTTGGATTGGCCAGTCTGTGGACCCAAAAGAAAAACAAAATGCTTTTAA 486 0.3827 MDVSAKNMIFGMAGIDPERRPKLIKVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVISILGDEEKQAIYDQIGCVDDADLARDVVQNLHNYFKTMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKCRSVCLDWPVCGPKRKTKCF* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1895 161 CDD DnaJ 25 76 IPR001623 -
Ahy19g1895 161 Pfam DnaJ domain 25 84 IPR001623 -
Ahy19g1895 161 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 22 144 IPR042977 -
Ahy19g1895 161 PRINTS DnaJ domain signature 59 79 IPR001623 -
Ahy19g1895 161 PRINTS DnaJ domain signature 42 57 IPR001623 -
Ahy19g1895 161 PRINTS DnaJ domain signature 24 42 IPR001623 -
Ahy19g1895 161 PRINTS DnaJ domain signature 79 98 IPR001623 -
Ahy19g1895 161 SUPERFAMILY Chaperone J-domain 25 94 IPR036869 -
Ahy19g1895 161 SMART dnaj_3 21 79 IPR001623 -
Ahy19g1895 161 ProSiteProfiles dnaJ domain profile. 22 87 IPR001623 -
Ahy19g1895 161 Gene3D DnaJ domain 16 113 IPR036869 -
Ahy19g1895 161 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 22 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1895 Ahy-Chr19 109410067 109412182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1895 25 84 C2H2 Transcription Factor Family AT1G74250 38.462 7.54e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1895 K09529 - vvi:100265910 221.09