Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1874 ATGCCTCCTCCATTTGATTCTATCTCTAAGATCCACCCTCCAAGGGAGGCATGGAGACTTAAAGTTAGGGTACTAAGAACTTGGATTGTTCCTTCATTTGAAAATCATGATGTTGCAAATTCAATGAAAATTGTTCTTATTGACGAAGATTCTAACAAAATCCAAGCAACTGTTAAGAAGCAGCTCATAAATAGGTTTAAAGAGAATATTATTGAGGGTCAAACATACCGAATGTCATATTTTAGTGTTGTTCCAAACCAAGGCAATCATAGGGTAGCAGAACATGAGTTTAAGTTGGTTTTCCTTAACCGTACAACTGTTATTCCTATCTCTGATGATGCTATCCCCAAGACATGTTTCAGTTTTTGTCCATTTGATGAGCTCTTGAAAATGACTGAAGATTATGTTTACTTAGTTGATGTTATTGGTTTGCTAACTTCTGTTGGTGAAGAGAAAGAGTATGTGAAAGATGGCAAAGTGATGAAGATGATCGTTCTTGAGTTATCTTCAAAAGAGTTGACAATACGCTGTGCTTTGTTTGGGGAGTACGTGGATGAAGTGCATCGTTTCTTAGGTTCTGGTTATATGGAGCATTCAGTTGTTGTGATCCAGCTTGCCAAAGTTAAATTCTTTAGGGATAGACAAGTTGGTCTCCAAAATGTTATGCATGCTACTCGCCTATTCTTTAATCCAAATTTGGCTGAAGTTGTTGATTTCAAAAACAGTATGGTTGACCAAGGTATCAATGGAACACAACCATTTGCTAATGAGGGCAAGGGTGTTTCATTGGAAGATAATTTTCTGCGGCTTACTAGGAGATGCACTATTGAGGAACTCCATGATAACAATGAGGTTTATTGA 861 0.3728 MPPPFDSISKIHPPREAWRLKVRVLRTWIVPSFENHDVANSMKIVLIDEDSNKIQATVKKQLINRFKENIIEGQTYRMSYFSVVPNQGNHRVAEHEFKLVFLNRTTVIPISDDAIPKTCFSFCPFDELLKMTEDYVYLVDVIGLLTSVGEEKEYVKDGKVMKMIVLELSSKELTIRCALFGEYVDEVHRFLGSGYMEHSVVVIQLAKVKFFRDRQVGLQNVMHATRLFFNPNLAEVVDFKNSMVDQGINGTQPFANEGKGVSLEDNFLRLTRRCTIEELHDNNEVY* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1874 286 Pfam Domain of unknown function DUF223 44 132 IPR003871 -
Ahy19g1874 286 CDD RPA1_DBD_B_like 140 243 - -
Ahy19g1874 286 Gene3D - 4 113 IPR012340 -
Ahy19g1874 286 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 22 282 - -
Ahy19g1874 286 CDD RPA1_DBD_A_like 19 107 - -
Ahy19g1874 286 Gene3D - 114 251 IPR012340 -
Ahy19g1874 286 SUPERFAMILY Nucleic acid-binding proteins 120 243 IPR012340 -
Ahy19g1874 286 SUPERFAMILY Nucleic acid-binding proteins 3 113 IPR012340 -
Ahy19g1874 286 PANTHER REPLICATION FACTOR A 1, RFA1 22 282 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1874 Ahy-Chr19 106408162 106409706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1874 8 255 Core DNA Replication Machinery Family AT2G06510 26.357 1.86e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1874 - - ahf:112778577 577.4