Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1864 ATGATGAAGCATGCGGCTATGGAGATAGAATCAAGTGACAAGGGTTCTTTGGGGCCAGGGTTGAGCCCTCTGAGTGAGACTCTTTGGAGAGAAAAGACAAACACAGAGCTCATTGGAGACGTCTCGGCCAGGCTGACATGGAAGGACTTAACTGTGACTGTCACACTCAGCACGGCGGGTGAGACGCAGAATGTTCTAGAAGGTCTAACTGGCTACGCTGAGCCGGGGACCTTCACTGCTCTCATGGGGCCGTCTGGTTCCGGAAAATCTACCCTTCTTGATGCCTTGTCCGGTCGCCTCGCCGCCAATGCCTTCCTCTCTGGGACCGTTCTTCTCAATGGTCGCAAAGCCAATCTCTCTTTTGGCACTGCTGCTTATGTGACACAAGATGACAACTTGATTGGGACACTAACAGTGAGAGAGACGATTTCATACTCTGCTCAGTTGCGGCTACCGGACAAGATGTCGCCGTCGGATAAGGAAGCACTTGTTGAGAGCACCATAGTGGCAATGGGGCTTCAGGATTGTGCAGACACTGTGATTGGGAACTGGCACTTGCGAGGGATAAGCGGTGGAGAAAAGAGAAGGGTTAGCATTGCCTTGGAGATCTTGATGAGGCCTAGATTGCTCTTCCTTGATGAACCTACAAGTGGACTTGACAGTGCATCAGCTTTCTTTGTGACTCAAACATTACGTGCCTTGGCAAGGGATGGAAGAACCGTGATAGCTTCTATTCATCAACCTAGCAGTGAAGTTTTCGAACTATTTGATCAATTGTACTTGCTTTCTGGGGGTAAAACTGTCTATTTTGGCCACGCTTCTGCAGCATATGAGTTCTTTGCACAAGCTGGATTTCCATGCCCTGCTTTGAGGAACCCATCAGATCACTTTCTTAGGTGCATCAATTCTGACTTTGACAAAGTCAAGGCCACTCTTAAAGGCTCCATGAAACTCAGGTTTGAGGCAAGTGATGATCCCCTTGATAAGATAACTACTGCTGAAGCTATCAGAACTCTCAATGAGTACTACCGAACTTCTCAGCATTCTTATGCTGCAATACAGAAAGTGGACGACATATCCAAAATTAAGGGAACCGTGCTCGATGCCGGAGGAAGTCAGGCTAGTTTCTTCAGGCAGTCATACACTTTAACCAAGCGCTCGTTGATTAACATGTCAAGAGATTTTGGTTACTACTGGCTTAGGCTTGTAATCTACATTGTGGTCACTATCTGCATTGGAACCATTTATTTGAACATCGGCACAAGCTATGACTCAATTCTGGCAAGGGGCTCATGTGCATCTTTTGTGTTTGGTTTTGTAACCTTCATGTCAATTGGTGGATTCCCGTCGTTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGGCTTAATGGCCACTATGGCGTGACAGCATTTGTGATCAGCAACACGTTATCCGCTATGCCATTCCTGATGCTAATCACCTTTCTCTCGGCTACCATTTGTTACTTCATGGTTCGCCTGCATCCCGGCTTTTCACATTATGTGTTCTTTGTCTTGTGCCTTTTTGCTAGCGTTATGGTGGTAGAAAGCTTAATGATGGCCATTGCTAGTGTTGTCCCCAACTTCCTCATGGGTATCATAACTGGAGCAGGGATTCAGGGTATATTCATGTTAGTCTCTGGCTTCTTTCGGCTCCCACATGATATCCCAAAGCCATTTTGGCGCTATCCAATGTCATATATAAGTTTCCATTTTTGGTCACTACAGGGACAATACCAAAATGATCTGAGGGGCTTGCTATTCGACAACCAATCGCCGGACCTTCCCAAAATACCGGGCGAATACATCCTGGAGAACGTTTTCCAAATCAATGTGAACCGGTCGAAGTGGATCGACCTAGGGGTGATCTTCAGCATGATTCTCGTGTACCGCATCATCTTCTTTGTGATGATTAAGGTCAATGAGGATGTCACTCCTTGGGTCAGAGGTTACGTAGCAAGAAGGAGAATGCAGAACAAGAATATTGCTCCTGATGCTCTCACTCAATCTCCATCACTGAGAGCATATGTTAATAGGGACACTCGTAGAAGGTAG 2076 0.4648 MMKHAAMEIESSDKGSLGPGLSPLSETLWREKTNTELIGDVSARLTWKDLTVTVTLSTAGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSGRLAANAFLSGTVLLNGRKANLSFGTAAYVTQDDNLIGTLTVRETISYSAQLRLPDKMSPSDKEALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGHASAAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEASDDPLDKITTAEAIRTLNEYYRTSQHSYAAIQKVDDISKIKGTVLDAGGSQASFFRQSYTLTKRSLINMSRDFGYYWLRLVIYIVVTICIGTIYLNIGTSYDSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLMLITFLSATICYFMVRLHPGFSHYVFFVLCLFASVMVVESLMMAIASVVPNFLMGIITGAGIQGIFMLVSGFFRLPHDIPKPFWRYPMSYISFHFWSLQGQYQNDLRGLLFDNQSPDLPKIPGEYILENVFQINVNRSKWIDLGVIFSMILVYRIIFFVMIKVNEDVTPWVRGYVARRRMQNKNIAPDALTQSPSLRAYVNRDTRRR* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1864 691 Gene3D - 39 284 IPR027417 -
Ahy19g1864 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 289 IPR003439 GO:0005524
Ahy19g1864 691 PANTHER OS04G0528300 PROTEIN 11 684 - -
Ahy19g1864 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 281 IPR027417 -
Ahy19g1864 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 11 684 - -
Ahy19g1864 691 MobiDBLite consensus disorder prediction 1 20 - -
Ahy19g1864 691 Pfam ABC-2 type transporter 379 585 IPR013525 GO:0016020|GO:0140359
Ahy19g1864 691 ProSitePatterns ABC transporters family signature. 189 203 IPR017871 GO:0005524
Ahy19g1864 691 SMART AAA_5 75 246 IPR003593 -
Ahy19g1864 691 CDD ABCG_EPDR 42 271 - -
Ahy19g1864 691 Pfam ABC transporter 68 217 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1864 Ahy-Chr19 102785940 102791541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1864 76 250 Calmodulin-binding Proteins AT2G36910 34.409 2.60e-11 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1864 19 102785940 102791541 Ahy19g1864 19 102785940 102791541 ECH