LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g1843	ATGACCTCTTCTTCTTCCTATTATTCTAGAAGCTTCTCGGCGAACCCGCGGGACTACAAGCTTCTGGAAGAAGTCGGATTCGGCGCCAGCGCAACCGTCTACCACGCCGTTCACATCCCCTCGAACGAGCAAGTCGCCGTGAAGGTCCTGGATCTGGACCGATGCAACAGCAACTTCGACGACATACGGCGAGAGGCTCAGACCATGAGCCTCATCGATCACCCCAACGTCGTCCGCGCCTTCTGCTCCTTCGTCGTCGACCGGAGTCTCTGGGTGGTTATGCCGTTTATGGACCAAGGCTCCTGCCTACACCTCATGAAGGTCGCATACCCCGACGGCTTCGAAGAAGATGCCATTGGATCCGTACTCAAGGAGACACTCAAGGCTCTTGACTACCTCCACCGCCATGGCCACATCCACCGCGATGTTAAGGCTGGGAATATACTTTTGGATTCCAATGGCGATATCAAACTTGCTGATTTCGGTGTTTCTGCTTGCATGTTTGATGCCGGCGATAGGCAGCGGTCCAGGAACACTTTTGTTGGAACTCCTTGCTGGATGGCACCGGAGGTGCTGCAGCCTGGAACTGGTTATAATTTCAAGGCTGATATTTGGTCTTTTGGGATTACGGCGCTTGAGCTGGCTCATGGTCATGCACCTTTCTCGAAATATCCTCCCATGAAGGTGCTTCTAATGACCATACAGAATGCCCCTCCGGGCCTTGATTATGATCGGGATAGGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCTTGGTAAAAGATCCGACAAAGAGACCGACGGTGGAGAAGTTACTGAAACATTCTTTCTTCAAGCAAGCCAAGCCTCCTGAGCTTTCTGTAAAGAAATTGTTTGCCGACTTACCTCCACTTTGGAATCGCGTAAAAGCTCTGCAGCTTAAAGATGCTGCTCAACTAGCACTAAAGAGAATGCCTTCTGCAGAGCAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCATGGAACTTTGATCTTGATGATTTGAAAGCTCAGGCTTCATCGGTAGAGAACAATGATGGTTTTGCCGAGATGAGGGAAGAAGATGAACCCAAAAGTGTTAGCGAGTACAAGGATACAACTGATTTTCAGCTTAATGTGGACAAGAATTCAGAAAACTCACAAGAAGATGAGTTTGGACTAGAAGTAGGTGTTTATCATCACACACCACAAAGTGAGAAGAGAAATGGATTGGTTGCCGAGGCATCACCTTCTACCCTAGATAAGGATACAGGATTGAGCAAGACCAAAATTCAATCAACGAGGATTCGTAAAACCCAGAGTGGGCCACTGGTGCCAGGCACAGTTCTTGGTCATTCTTTACCTGATAGAGGGTCTACATTTGAAAGGTTAGAGAGTGAAAATCAGTCATCAGGTGACAAAAGTAGTCGTGATTCCCGACGAGCTCCCAACTTTAGTGGTCCATTGATGCTTCCAAACAGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATACAGAGATACTTTGGATGATAAATCTAAGACTAATCTAGTGCAAATCAAAGGACGATTCTCAGTGACTAGAGAGAATTTAGATCTGGTGAAGGATATCCCCGTAAGTTCAGTTTCACGCAGATCTTCACAGGGATCACCGCTGAGGAAATCTGCCAGTGTTGGTGATTGGATGCCGGATGCCAAACAAATGCCAGTTGGTCAGTCATCAAAAGATTCTGCGAATATCAATGTTTCTGCCTCACCTCTTATACCTCACCTTCAAAACCTTTTTCATCAGACATCTATTCAACAGGATCTCATAATGAATCTTTTGAATAGCTTGCAACCTGCCGAGGCAGTTGATGCTTCTCAGAATGGAAAGTTGCCACCATTACCTCGCACTCCAGAGAACAATGGGAATATCGAAACAACAGCCTCGGAGAGGGAGCAACTGCTACTGCTAAAAGTTTCAGAACTTCAAGCACGGATGATGAATTTGACCGATGAATTGAATTCTGAAAGGTTAAAATACCAGCAGTTGCAACAACAGTTAAATGCTCTTTACAGTCAAGAACAAAATGGAAAAAGAGGAGTTGCATGA	2124	0.4595	MTSSSSYYSRSFSANPRDYKLLEEVGFGASATVYHAVHIPSNEQVAVKVLDLDRCNSNFDDIRREAQTMSLIDHPNVVRAFCSFVVDRSLWVVMPFMDQGSCLHLMKVAYPDGFEEDAIGSVLKETLKALDYLHRHGHIHRDVKAGNILLDSNGDIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDPTKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDLDDLKAQASSVENNDGFAEMREEDEPKSVSEYKDTTDFQLNVDKNSENSQEDEFGLEVGVYHHTPQSEKRNGLVAEASPSTLDKDTGLSKTKIQSTRIRKTQSGPLVPGTVLGHSLPDRGSTFERLESENQSSGDKSSRDSRRAPNFSGPLMLPNRASANSLSAPIKSSGGYRDTLDDKSKTNLVQIKGRFSVTRENLDLVKDIPVSSVSRRSSQGSPLRKSASVGDWMPDAKQMPVGQSSKDSANINVSASPLIPHLQNLFHQTSIQQDLIMNLLNSLQPAEAVDASQNGKLPPLPRTPENNGNIETTASEREQLLLLKVSELQARMMNLTDELNSERLKYQQLQQQLNALYSQEQNGKRGVA*	708

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g1843	707	MobiDBLite	consensus disorder prediction	552	588	-	-
	Ahy19g1843	707	ProSiteProfiles	Protein kinase domain profile.	19	280	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy19g1843	707	PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	9	701	-	-
	Ahy19g1843	707	MobiDBLite	consensus disorder prediction	407	517	-	-
	Ahy19g1843	707	MobiDBLite	consensus disorder prediction	496	511	-	-
	Ahy19g1843	707	ProSitePatterns	Protein kinases ATP-binding region signature.	25	48	IPR017441	GO:0005524
	Ahy19g1843	707	Gene3D	Phosphorylase Kinase; domain 1	8	96	-	-
	Ahy19g1843	707	Gene3D	Transferase(Phosphotransferase) domain 1	100	329	-	-
	Ahy19g1843	707	MobiDBLite	consensus disorder prediction	425	446	-	-
	Ahy19g1843	707	SMART	serkin_6	19	280	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy19g1843	707	Pfam	Protein kinase domain	19	280	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy19g1843	707	Coils	Coil	664	698	-	-
	Ahy19g1843	707	MobiDBLite	consensus disorder prediction	359	394	-	-
	Ahy19g1843	707	MobiDBLite	consensus disorder prediction	629	649	-	-
	Ahy19g1843	707	MobiDBLite	consensus disorder prediction	463	485	-	-
	Ahy19g1843	707	CDD	STKc_OSR1_SPAK	18	280	-	-
	Ahy19g1843	707	MobiDBLite	consensus disorder prediction	355	394	-	-
	Ahy19g1843	707	SUPERFAMILY	Protein kinase-like (PK-like)	17	331	IPR011009	-
	Ahy19g1843	707	PANTHER	PROTEIN KINASE SUPERFAMILY PROTEIN	9	701	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g1843	Ahy-Chr19	98671861	98679511	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy19g1843	10	700	MAP Kinase Kinase Kinase Kinase	AT4G24100	65.050	0.0	895

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Fray	Ahy19g1843		Pkinase	8.10E-62	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g1843	-		-	gmx:100783699	1118.61