Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1823 ATGTATGGAGCAGCGGTTTTAGATGCATATGAGCAAATAAAGGTACGCATGGAACCTGTTGCTTCATGGAACAACTTCAACTCATTTGCTGAGCACATTCAAAATAGGTACCATGGAACATATAGTCCTATTAGGAGAATCAAGATTCTTGGATGGCAACAAGTTGCTGAAAAAATTGGAATGCAACATTGTGCTGCATCAGGCCAATGGCTAAATGAGAGAATTGCTCTCTCAAGATATGCCCATGTACCACTTGGAAATTTTGAACTTGACTGGCTTATATTTACAGCAGATACCTTCTTCTCAAGAGCTTTGCGTGATAGTCAACAGAGACATGTTTTCTTGATGAGGGATCATTATGATTACTATTCAAGAAGAAACTTGTTTCCAAGTACCTCAGGCACCTATTTTTCATTCCAGAATGAGCCTTTGAATGTTGACTATAAATTTTAA 453 0.3797 MYGAAVLDAYEQIKVRMEPVASWNNFNSFAEHIQNRYHGTYSPIRRIKILGWQQVAEKIGMQHCAASGQWLNERIALSRYAHVPLGNFELDWLIFTADTFFSRALRDSQQRHVFLMRDHYDYYSRRNLFPSTSGTYFSFQNEPLNVDYKF* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1823 150 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 45 110 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Ahy19g1823 150 Pfam Domain of unknown function (DUF1744) 46 109 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1823 Ahy-Chr19 96855263 96859356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1823 35 110 Core DNA Replication Machinery Family AT1G08260 57.895 3.32e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1823 K02324 - aip:107619117 317.005