Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1812 ATGATGATGAGGATGATAGACCAACACAACTTGGTACTTTGCGTAGCTTTATCGTCACTTTGCATTGCTTTTGCTCCTTGGATCTCTATTGAAGCTGCCCCTCCATCCTCTCTTATCACACAACTCCCTGGCTTCAAAACTTCTTTCCCATCCAAGCATTATTCCGGATATATAACTGTTGATGGAAATGTTGAGAGTGGGAAGAACCTGTTCTACTACTTTGTAAGTTCCGAAAGAAATCCAGCAAAGGATCCAGTTGTTCTATGGTTGAATGGTGGACCAGGTTGTTCTAGCTTCGATGGCTTCGTTTATGAGCATGGGCCATTCAACTTTGAGGCTTCAAGAACGGAAGGGAATCTTCCCACCTTGCATATCAATCCATACAGCTGGTCTAAGGTTTCCAGTATTATTTATTTGGATTCACCTGCTGGGGTGGGTCTCTCTTACTCCAAGAATTCCAGCAAATACAACACTGGGGACTTACAAACTGCATCTGATACTCATGCTTTTCTCCTAAAGTGGTTTGAGGAATTCCCTGAATTTCTTGAAAATCCATTTTATATTTCCGGGGAGTCTTATGCTGGAATATATGTTCCCACGTTGGCTTATGAAGTGGTCAAAGGAATCAAGGGTGGTATTAAGCCCGTGATCAATTTCAAGGGTTATATGATTGGAAATGGTGTCACGGACAACACCTTCGATGGCAACGCTTTTATCCCATTTGTGCATGGGATGGGCCTCATATCCGACAGTATCTACGAGGAAGTAAAAGCTTATTGCAAAGGAAATGATGACGAAAGTGATATGTGCTCAAAGAGTTACCTAAAAGTTGACAGGGCCATTGAAGATCTTAATGTGTACAACATACTAGAGCCATGCTATCATAACTCAAATACAGGTTCAACAGGGAATGTGAGTTTGCCAACAAGTTTCAAGGAATTAGGGAAAAGTGAGAAGCCACACCCACACCCTGTGAGGAAGAGGATGTTTGGTAGGGCATGGCCCCTTAAAGGCACAGTCAAAGAAGGCCCAGTTACATTGTGGCCCCAGTTGGCTGAAGATGGCCACATTCCTTGTGTCAGTGATGAGGTAGCAACTTCATGGCTGAATAACCAAGAAGTCAGACAGGCCATCCATGCTAAACCGAAAAGTGTTGCGGGTCCGTGGGAATTATGCACTAGAAGGATATATTACAATCACGATGCTGGAAGCATGATTCCATACCACAAGAAACTAACCATCATGGGCTATCGAGCACTAATTTTCAGTGGTGACCATGATATGTGTGTGCCATTTACTGGAACTGAGGCATGGACACGATCTCTTGGATATAAGATCATAGATGAATGGAGACCATGGACCTCTAATGACCAAGTTGCTGGATACTTGCAGGCATACAATAACCACCTCATCTTCCTCACTGTCAAGGGAGCTGGACACACAGTCCCTGAATACAAGCCACGCGAGGCACTGGATTTTTACAGCAGATGGTTGGAAGGGAAATCCATATAA 1512 0.4372 MMMRMIDQHNLVLCVALSSLCIAFAPWISIEAAPPSSLITQLPGFKTSFPSKHYSGYITVDGNVESGKNLFYYFVSSERNPAKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEASRTEGNLPTLHINPYSWSKVSSIIYLDSPAGVGLSYSKNSSKYNTGDLQTASDTHAFLLKWFEEFPEFLENPFYISGESYAGIYVPTLAYEVVKGIKGGIKPVINFKGYMIGNGVTDNTFDGNAFIPFVHGMGLISDSIYEEVKAYCKGNDDESDMCSKSYLKVDRAIEDLNVYNILEPCYHNSNTGSTGNVSLPTSFKELGKSEKPHPHPVRKRMFGRAWPLKGTVKEGPVTLWPQLAEDGHIPCVSDEVATSWLNNQEVRQAIHAKPKSVAGPWELCTRRIYYNHDAGSMIPYHKKLTIMGYRALIFSGDHDMCVPFTGTEAWTRSLGYKIIDEWRPWTSNDQVAGYLQAYNNHLIFLTVKGAGHTVPEYKPREALDFYSRWLEGKSI* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1812 503 Gene3D alpha/beta hydrolase 32 313 IPR029058 -
Ahy19g1812 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 502 IPR001563 GO:0004185|GO:0006508
Ahy19g1812 503 Pfam Serine carboxypeptidase 43 500 IPR001563 GO:0004185|GO:0006508
Ahy19g1812 503 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Ahy19g1812 503 ProSitePatterns Serine carboxypeptidases, histidine active site. 470 487 IPR033124 GO:0004185
Ahy19g1812 503 Gene3D - 359 397 - -
Ahy19g1812 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Ahy19g1812 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Ahy19g1812 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Ahy19g1812 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Ahy19g1812 503 PANTHER CARBOXYPEPTIDASE 16 502 - -
Ahy19g1812 503 Gene3D - 405 500 - -
Ahy19g1812 503 SUPERFAMILY alpha/beta-Hydrolases 39 501 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1812 Ahy-Chr19 95374522 95397069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1812 342 503 Calmodulin-binding Proteins AT2G22960 46.914 9.68e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1812 K16296 - gmx:100790895 782.326