Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1762 ATGATAGGAGAACGTGCAGGACGAACAGAGAGGGAGCGAGCCGCCGGCAGTGATGACGGGGTGGCGGCGGAGGGGTTGGTCACGTGTCGCCATGAAGGAACAGTTGCGTTCACCTCTGGAGCGTGGAACGTCTTTGATGAGAAATCATTTCATGAAGTTCAACAAGCTTTCGACAGCTACAAAATGGTGGACGGCCGCAACACCAATGTGTACGTCACCAGTCATGGCTACATCATGCTCCAATACGTCTCGAACGTGATCATCCATAGCATCCACGTCCACCATTGCAAGCCCTCTAACAACACCAACCTAAGAGCCTTTATGACCCACATGGGGTGGAAGGGAGTCTCCAACGATGACAAAATCTCCATGTTTGGGTCATGCAAGATCTGGATTTGA 399 0.5163 MIGERAGRTERERAAGSDDGVAAEGLVTCRHEGTVAFTSGAWNVFDEKSFHEVQQAFDSYKMVDGRNTNVYVTSHGYIMLQYVSNVIIHSIHVHHCKPSNNTNLRAFMTHMGWKGVSNDDKISMFGSCKIWI* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1762 132 PANTHER PECTATE LYASE 35 132 - -
Ahy19g1762 132 SUPERFAMILY Pectin lyase-like 54 132 IPR011050 -
Ahy19g1762 132 PANTHER PECTATE LYASE 18-RELATED 35 132 IPR045032 GO:0030570
Ahy19g1762 132 Gene3D - 15 132 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1762 Ahy-Chr19 82393444 82398371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1762 18 132 Polysaccharide Lyase AT1G04680 37.607 1.82e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1762 K01728 - ahf:112778492 260.766