Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1754 ATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGGTGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAATGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGTCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCCGAGATTAGCACTTCACAGATATTTGGTCTTCTAGCTAATCAAGCAGGCGGGTATGAATTTGTTGGCTATAGTCCTAGAGATATGTACAATGAGATTACTCGGCAAAGGCGTCAAATTCCTGGTGATGCGGCACGTGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAATCATGTCAAGATTCAAGAGGTTTGTTACGTAACTTGTTCTGGTCTGATGGGATTAGCCAACTAGACTACCAACTCTTCGGGGATGTTATTGCTTTTGATGCTATATACAAGAAGAACAAGTATAGTTGTCCATTAGTCATATTCAACGGGGTTAACCACCACAAGCAAACAATTGTTTTTACTGCTGCGTTAATTGTGGACGAAACTACTGATACATATATTTGGCTCCTGCATCAGCTCATGTTTGCAATGAAGGGTAAGACCCCGACCTCAATAATAACTGATGGGGCCATGACGATTAGCAATGCAGTAAGAGATGTATTTCCCGAAGTCAGACATAGATTATGCGCTTGGCACCTTATTCGAAATGCAACTAGCAATGCTGAAAATCCATCGTTTATATCTAAATTCAGAAAAATCATGTTGGGAGATTACGAGATTCCTGTGTTTAAGCATAAGTGGGTTCAACTTATTGAAGAATTTGGAGTTGAGGATAAGTCGTGGGTGAATAACATGTATGAAGAGAAGCATATGTGGGCTACTGCATATATAAAAGAAAAATTCTTTGCTGGCTTTAGAACTACCTCAAGATGTGAAGGTTTACACTCAGTTGTGGTAAGGTATGTGGGGTCGCGGTATGATTTGACAAGTTTTGTAGAGCATTTTCAAAGGTGTGTTGCACACTTGCGCTTTAAAGAATTTAATGCTGATTATGAATCTACATGTGGGGTGCCCGTCATGCAGACTTGTATAGAGCTGCTAGAGAGATTTGCTGCTGAGTTATACACAAATGAGATATTTTTATTGTTTCGGCCATTTCTCTCTAGAGTTGGATCAATGCGGGTGCTAAACATAGAGAATAACGATGATTGCATAAAGTACATTGTGTGTAATCATGGGAGGCCCGAATTTTTGTGGACTGTTGAATTTTGTCAAGAAGAAATGATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGAATTCTCTGCGAACATATTGTGAAAGTTCTGGTTGACAGAGACATTTGTGAGATTTTTCGGTTATTGCTATTGGATAAATGGACAAAAAAGGTGAAACCAGCACTCAATGATCCAAGTGGGTTCTCCAGGGATGCTGTTGTTATTAGTCGTTAA 1545 0.3922 MEKRKKEPRLETRTGCEARMDVKFVPENGRWHIFYFSDEHNHDLLDTQFSAMLPVHRKMSEADIMQMMNMLKSEISTSQIFGLLANQAGGYEFVGYSPRDMYNEITRQRRQIPGDAARVLKKLEDMRLKDPQLYFKSCQDSRGLLRNLFWSDGISQLDYQLFGDVIAFDAIYKKNKYSCPLVIFNGVNHHKQTIVFTAALIVDETTDTYIWLLHQLMFAMKGKTPTSIITDGAMTISNAVRDVFPEVRHRLCAWHLIRNATSNAENPSFISKFRKIMLGDYEIPVFKHKWVQLIEEFGVEDKSWVNNMYEEKHMWATAYIKEKFFAGFRTTSRCEGLHSVVVRYVGSRYDLTSFVEHFQRCVAHLRFKEFNADYESTCGVPVMQTCIELLERFAAELYTNEIFLLFRPFLSRVGSMRVLNIENNDDCIKYIVCNHGRPEFLWTVEFCQEEMIFMCTCLRMESFGILCEHIVKVLVDRDICEIFRLLLLDKWTKKVKPALNDPSGFSRDAVVISR* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1754 514 ProSiteProfiles Zinc finger SWIM-type profile. 440 478 IPR007527 GO:0008270
Ahy19g1754 514 Pfam FAR1 DNA-binding domain 3 45 IPR004330 -
Ahy19g1754 514 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 499 IPR031052 GO:0006355
Ahy19g1754 514 PANTHER OS02G0262500 PROTEIN 4 499 - -
Ahy19g1754 514 Pfam MULE transposase domain 165 259 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1754 Ahy-Chr19 81371250 81372794 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g1754 MULE 1.80E-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1754 - - aip:107607175 944.88