Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1746 ATGGAGTCAGAGCGAGACAAATACAGCATGATAAATTTTGAGGAGACCGAGTTGCGACTCGGTTTGCCGGGTGGGTCGAACGATGGCGAGTCATCACTTAGGAGCACTTGTACTACAACTGGAAAGAGGGGTTTCTCGGAGACTACTCCGTCTACTGTGGATCTAAAGCTGAATCTGAATCTTTCTTCTTCTTCTTGTTCTTCTTCTCTTAACAATGAATCCGTTTCAGCTTCTTCTGTCAACGTTGACAAGAACAAAGAGAAGAATGGTGGTGCTGCTGCTCCTACTTCTACACCTCCTGTTACTCGTTCTACCGACCCGGCGAAACCACCTGCCAAGGCACAAGTAGTAGGTTGGCCTCCAGTTAGGTCCTTCAGGAAGAACATAGTAAGCGGGCAGAAGAGCAACAAGGAAGAAGTGGAAAAGCCCGCCACCACCACCGTAGGTCAAACTGCAACCGCGACCTCCGCGGCAACAAGCGGCAACGGAGGGGCGTACGTGAAGGTGAGCGTGGACGGAGCACCATACTTGAGGAAAGTGGACCTGAAGCAGTACAAGAGCTACAGAGAGCTGTCAGATGCGCTGGCAAAGATGTTCAGTGGCACCATGATAGAGCCAGCTGTCAGTGGGCCCCATCACGAGTTCAAAGGAAATGGCCTCTTCAGCTTCAATGGATCTGACTATGTCCCCACTTATGAAGACAAAGACGCTGATTGGATGCTCGTCGGTGACGTTCCCTGGGAAATGTTCGTAGAATCATGCAAGCGCCTTCGCATAGTGAAAGGTTCTGAGGCAACTGGGCTTGGAGTTCCAAGAGCAGCAGCGGAAGAGCAGTGCAAGATCAGAAGCTGA 852 0.5094 MESERDKYSMINFEETELRLGLPGGSNDGESSLRSTCTTTGKRGFSETTPSTVDLKLNLNLSSSSCSSSLNNESVSASSVNVDKNKEKNGGAAAPTSTPPVTRSTDPAKPPAKAQVVGWPPVRSFRKNIVSGQKSNKEEVEKPATTTVGQTATATSAATSGNGGAYVKVSVDGAPYLRKVDLKQYKSYRELSDALAKMFSGTMIEPAVSGPHHEFKGNGLFSFNGSDYVPTYEDKDADWMLVGDVPWEMFVESCKRLRIVKGSEATGLGVPRAAAEEQCKIRS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1746 283 Pfam AUX/IAA family 15 269 IPR033389 -
Ahy19g1746 283 Gene3D - 159 274 - -
Ahy19g1746 283 SUPERFAMILY CAD & PB1 domains 159 259 - -
Ahy19g1746 283 MobiDBLite consensus disorder prediction 28 51 - -
Ahy19g1746 283 MobiDBLite consensus disorder prediction 64 103 - -
Ahy19g1746 283 ProSiteProfiles PB1 domain profile. 164 267 IPR000270 GO:0005515
Ahy19g1746 283 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 272 IPR003311 GO:0005634|GO:0006355
Ahy19g1746 283 MobiDBLite consensus disorder prediction 19 51 - -
Ahy19g1746 283 PANTHER AUXIN-RESPONSIVE PROTEIN IAA16 11 272 - -
Ahy19g1746 283 MobiDBLite consensus disorder prediction 64 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1746 Ahy-Chr19 79723539 79728052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1746 166 270 B3 DNA Binding Superfamily AT5G20730 31.429 1.05e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Ahy19g1746 AUX_IAA 1.90E-72 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1746 K14484 - gmx:100796888 268.855