Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1727 ATGTACTACTCATGCCCTTCTGATTGTGTAAAAGCAACTATTGATAGGTATAAGAAAGCATGTTCAGATTCATCTGGTGCTGGATCTGCTTCCAAGATTAATGCTCAGTATTACCAGAGTGTTGATGATGAGAACAAATACCATGTGAAATGGAAAGAGCTTCCATATGATAAATTCTATTGGGAGTTTGAGACAGATATTTCAACATTTCAACCAGAAATAGAAATATTCAATAAATTCTGGTCTAGATCTAGCAAACTTGCCTCTATGAAGCAAAGAAGTAGTGTTAAGGATGATGTTGAATTGAAGAATTACAATATGTAA 324 0.3395 MYYSCPSDCVKATIDRYKKACSDSSGAGSASKINAQYYQSVDDENKYHVKWKELPYDKFYWEFETDISTFQPEIEIFNKFWSRSSKLASMKQRSSVKDDVELKNYNM* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1727 107 Pfam Chromo (CHRromatin Organisation MOdifier) domain 40 79 IPR023780 -
Ahy19g1727 107 Gene3D - 30 79 - -
Ahy19g1727 107 SUPERFAMILY Chromo domain-like 38 80 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1727 Ahy-Chr19 73698767 73699346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1727 11 39 MADS-box Gene Family AT4G18960 68.966 1.80e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1727 K11643 - ahf:112778454 215.698