Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1674 ATGGTACAACAAGTTGTTGTCCATCCTGAATATAATTCTGCAGGCCCATGCGATGATTCAAACATAAATACTCGTTTCAAATCTATATCATCTCTTTATCAAAATGGGCCAAATCCCAATCATGCGAATTTGACTAACATGGTACAACGAGCTGTTATTCATCCTGAACATAATTCTAGAGGCCCATGCGATGATTCAAATGTAAATTGTCGTTTCAAATCTATATCAGCTCTTTATCAATATGGGCCAAATCTCAACCATGCCAATTTAACAAAAATGGCACAACAAGCTATTGTTCATGCTGAAAATAGTTATGTTCAATTTTTGAGTGACATAACAAAAGGTTCTGAAAAGGTTGTAATTTCATTATTAGATGACACTGGAAGTGAGGAGTTGCCTAAGTTTAATTACATACCAAATAATATAATCTATCAAAATGCTAATGTGAACATTTCACTTGCTCGGGTTGCGGATGAGGGTTGTTGTTCTGATTGTTTAGGCAACTGTCTTTCTTTGACATTTCCTTGTGCATGTTCTCAAGAAACTGGTGGGGAGTTTGCTTATACTCGAGAAGGTTTGTTGAAGGAAAAGTTCTTAGAAGCATGCATAGCTATGAAAATCAAACCTCAGCCATATCATTTTGTGTATTGTCAAGAATGCCCAATTTATAAAGGGAGTGAGCACATGCCTGAAGAATGCAAGGGGCATTTGGTTAGAAAGTTTATAAAGGAATGTTGGAGGAAATGTGGATGTGATATGCAGTGTGGAAATCGGGTAGTGCAGCGAGGTTTAAGATGTAAACTGCAGGTATTCTTGACTCAGGAAGGAAAGGGCTGGGGCATTAGAACACTAGAAGATTTGCCCAAAGGCTGCTTTGTATGTGAGTACGTCGGAGAAATATTAACCAATGCAGAATTGTATGAAAGGGTATTACACAAAAGCAGCAAGGACAGACATACATATCCTGTAACCCTTGATGCAGATTGGGGCTCAGAAAGGGTGTTAAAGGATGATGAGGCACTGTGCTTAGATGCAACTTATAATGGAAATATTGCAAGGTTTATCAATCATAGATGCTTTGATGCAAATTTGATAGACATTCCTGTTGAAGTGGAGATTCCTGATCGCCACTATTATCATGATTATGGTATTGACTTTGATGATCAGGAACATCCTATTAAAGCATTTCAATGCTGCTGTGGAAGTACCTTCTGCCGTGACAAGAAAAAGAAAGGAACTGGCATGAAAGCTAAAAAACAAAGGTAG 1266 0.3791 MVQQVVVHPEYNSAGPCDDSNINTRFKSISSLYQNGPNPNHANLTNMVQRAVIHPEHNSRGPCDDSNVNCRFKSISALYQYGPNLNHANLTKMAQQAIVHAENSYVQFLSDITKGSEKVVISLLDDTGSEELPKFNYIPNNIIYQNANVNISLARVADEGCCSDCLGNCLSLTFPCACSQETGGEFAYTREGLLKEKFLEACIAMKIKPQPYHFVYCQECPIYKGSEHMPEECKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLRCKLQVFLTQEGKGWGIRTLEDLPKGCFVCEYVGEILTNAELYERVLHKSSKDRHTYPVTLDADWGSERVLKDDEALCLDATYNGNIARFINHRCFDANLIDIPVEVEIPDRHYYHDYGIDFDDQEHPIKAFQCCCGSTFCRDKKKKGTGMKAKKQR* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1674 421 SUPERFAMILY SET domain 120 406 IPR046341 -
Ahy19g1674 421 Pfam Pre-SET motif 112 258 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy19g1674 421 SMART set_7 266 389 IPR001214 GO:0005515
Ahy19g1674 421 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 92 416 - -
Ahy19g1674 421 ProSiteProfiles Pre-SET domain profile. 161 263 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy19g1674 421 Pfam SET domain 278 364 IPR001214 GO:0005515
Ahy19g1674 421 CDD SET_SETDB-like 133 380 - -
Ahy19g1674 421 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 22 421 IPR025776 -
Ahy19g1674 421 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 92 416 - -
Ahy19g1674 421 Gene3D SET domain 87 382 IPR046341 -
Ahy19g1674 421 ProSiteProfiles SET domain profile. 266 404 IPR001214 GO:0005515
Ahy19g1674 421 SMART preset_2 109 250 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1674 Ahy-Chr19 62655467 62667283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1674 242 406 C2H2 Transcription Factor Family AT2G23740 36.898 3.06e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy19g1674 Pre-SET 3.30E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1674 - - adu:107465821 822.772