Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1646 ATGCTTTCCCCGTTTGTTTCGTGGCTCTTGTCTTCCACCACCTCCTCCTCTTCCTCTTCATCTTCTGATGAACAAGAACAAAGCATTGACATAGACGACACTTCAACCGACCAACCAGACCCTGAAAACGACATTGTCAACGACCAAAACGACAACAATCACCAAACAAACGGGGACGAAAATGATGAGCATTTTCTTAGTTCATGCGACGGGGACGACGCAATTCCCGTTGCTCTTGCCGTTCCCGCCACCGAACCCTCCCCGAGCCCCGCCGTCACGGTAGCCTTTACCACTGCTGATGATAGAATCCCCGTCGCAACCACAGCCGCAGCCACCACCATCGTGACACAGTCGAAACGGCAGCGTGCTGCGAACTACGCAGGCATGATTAGGCAATACCAGAGGCTTTGGACAAAGCAGGACGAGATAGAACTATTGAGAGGGTACCTTGAATACGTTAGACGAAACAAAGGCGTGAGAAAGTCCCTCCAAAACGACGTAGCTTCGTTCTACGGTGACGTGTGCCACAAGCTAAACGTGGATTTCAACAAGAACCAGCTTGTTGAGAAGCTGAGGAGGCTAAAAAGGAAACACAAGGTGACTCTGGATAAGGGCAATTTGGGAAAAGTGTCCTTCAGAAACCCTCAGGACGAGACGATTTTCGAGATTTCGCACAAGATTTGGGGCAAAGACATTGACACTGACCAATTAGTAGAAGAAGAAGAAGAAGAAGAAGAAGCATTTGATATGGATGGTGGTGGGGTTGATGATGATCATGGCAAGGTTAAGCTGAAAGTTGAAAAGGTTGTGAGTTGTGATGAGATTGAGAAAAGGGCGCCGAAGCGGCCGCGACTAAGCAAAAATCGCGACGAGACAGCAACGGCTGCTGACATGCAGATCCAGAGCTTCATTGAGGAAACCATGAGGTCTTGTTTCTCACCATTGATAAAGGAATTGTTGGATGATGAAGGAAGATCGAAGCCGGTAGAGTTTTCCCCTTCCCTTGGAGATGAGGGTGATGAGCAATGGAGGAAGCAGAGGATTTCAGAGCTCGAAGTGTATTTGAATCGGTTAGAGTTGTTACAGGATCAGATCAAGGCTAAATTAGAAGAGCTTAGGTCAGGGGGTTTGGCAATGGCATGGAGGGATGGTTGCACTGTTCAGATTTTACAGCATGGTAGATTTTTCATTGCGGCATCAGTTCTGACAGCTGGTTCTAATGATCCCTATGGTGTTCTAGGTGTTTATCTCAGTTCAAATGATCAACATAGAATGGCTCAATTTGCTGAATTAACTTCAGTCACCCAATAG 1311 0.4729 MLSPFVSWLLSSTTSSSSSSSSDEQEQSIDIDDTSTDQPDPENDIVNDQNDNNHQTNGDENDEHFLSSCDGDDAIPVALAVPATEPSPSPAVTVAFTTADDRIPVATTAAATTIVTQSKRQRAANYAGMIRQYQRLWTKQDEIELLRGYLEYVRRNKGVRKSLQNDVASFYGDVCHKLNVDFNKNQLVEKLRRLKRKHKVTLDKGNLGKVSFRNPQDETIFEISHKIWGKDIDTDQLVEEEEEEEEAFDMDGGGVDDDHGKVKLKVEKVVSCDEIEKRAPKRPRLSKNRDETATAADMQIQSFIEETMRSCFSPLIKELLDDEGRSKPVEFSPSLGDEGDEQWRKQRISELEVYLNRLELLQDQIKAKLEELRSGGLAMAWRDGCTVQILQHGRFFIAASVLTAGSNDPYGVLGVYLSSNDQHRMAQFAELTSVTQ* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1646 436 Coils Coil 351 375 - -
Ahy19g1646 436 MobiDBLite consensus disorder prediction 1 25 - -
Ahy19g1646 436 Coils Coil 184 204 - -
Ahy19g1646 436 MobiDBLite consensus disorder prediction 55 69 - -
Ahy19g1646 436 MobiDBLite consensus disorder prediction 1 69 - -
Ahy19g1646 436 PANTHER BNAANNG10740D PROTEIN-RELATED 1 374 IPR007592 GO:0006355
Ahy19g1646 436 Pfam Protein of unknown function, DUF573 134 229 IPR007592 GO:0006355
Ahy19g1646 436 MobiDBLite consensus disorder prediction 40 54 - -
Ahy19g1646 436 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 1 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1646 Ahy-Chr19 58386210 58388855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1646 82 374 GeBP Transcription Factor Family AT5G28040 35.211 6.87e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ahy19g1646 DUF573 1.80E-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1646 - - ahf:112775206 818.535