Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1609 ATGGCCTTTTCTCAAACCCTAGAACATGAATCTCCCTCTCTGGTCTTCACAGTCCACAGAAAACAACCAGAGTTAGTAGCTCCTTGTAAGGCCACACCCCATGAAATCAAGCTTCTATCCGACATTGATTCGCAAGCCGGCCTTCGCGCCCAAATTCCGATCATACAATTCTACTGTAGTGAGCCTTCAATGGAAGGAAAAGACCCAGTTGAAATCATTAGGAATGCAATTGCACAAGCACTTGTGTTCTATTATCCACTTGCTGGTAGGCTTAGGGAAAGGCCTGATGGAAAACTCATGGTGGATTGTAATGAAGAAGGAATTATGTTCATTGAAGCTGATGCTGGTGTCACACTTGATCAGTTTGGTGATGCTCTTGAACCTCCATTTCCATGCTTTGAAGAGCTCCTCTATGATGTTCCCGGTTCAGAAGGAGTTATTGATACTCCCCTTCTTCTTATTCAGGTGACTCGTCTGAAGTGCGGCGGTTTCATCTTCGGCCTCCGCTTCAACCATGCCATGATCGACGGCGTCGGCATCGTAACGTTCATGTACACCCTCTCCGCCTTCAGCCACGGCGCACAAGACCCTCCCTTCACCCCAATTTGGCGCAGGGAACTCCTAACGGCACGTGACACCCCTCGCGTCACGTGCCCCCACCCGGAATACGACCAGCTCACAGACCTAAACGTAACTACCCTCCCCACCGATCTCCAGCAACATTCCTTCTTCTTCGGAGATTCCGAGGTATCAACCCTCCGATCCCTCCTCCCGGAAAGCCTCTCCAGTGCAACCACCTTCCAAATACTCACCGCATTCGTATGGCAATGCCGAACCAAAGCATTGCGTTTCAACCCAAACGACTACGTTAGAATGATGTGCATAACCGATGGGCGCGCGAAGTTTAACCCTCCCATTCCAAACAGTTACTACGGTAACTGCTTGGTGCTCCCGGCAGCAGTTACAACCGCCGGGAAGCTGACCGAGGGCACGCTTGGATACCCCGTGGGGCTTATAAAAGAGGCAATTGAGAAGGTTGACGAAGAGTATATACATTCTGTGGCGGATTTTATGGTTACAAATGGGAGGCCTTTGTTTACTACAGTAAGGTCTTGCGTTGTGTTGGATACTACTTATGCTGGGTTCAGAGGCGTGGATTTTGGGTGGGGTAAGGCTTTGTACGGAGGGTTAGCGAAACCTGGTGCTGGTGCATTTCCTGCGGTGAATTTTCATGTTCCTAGCCAGAATGAGAAGGGAGAAGAAGGTATATTGGTTCTGACTTGTTTGCCTACTCAGGCTTTGAAGGCTTTTGCCAAAGTCATGGATGAGGTGCTTGAGAGTAACCAAACAAATTAA 1356 0.4919 MAFSQTLEHESPSLVFTVHRKQPELVAPCKATPHEIKLLSDIDSQAGLRAQIPIIQFYCSEPSMEGKDPVEIIRNAIAQALVFYYPLAGRLRERPDGKLMVDCNEEGIMFIEADAGVTLDQFGDALEPPFPCFEELLYDVPGSEGVIDTPLLLIQVTRLKCGGFIFGLRFNHAMIDGVGIVTFMYTLSAFSHGAQDPPFTPIWRRELLTARDTPRVTCPHPEYDQLTDLNVTTLPTDLQQHSFFFGDSEVSTLRSLLPESLSSATTFQILTAFVWQCRTKALRFNPNDYVRMMCITDGRAKFNPPIPNSYYGNCLVLPAAVTTAGKLTEGTLGYPVGLIKEAIEKVDEEYIHSVADFMVTNGRPLFTTVRSCVVLDTTYAGFRGVDFGWGKALYGGLAKPGAGAFPAVNFHVPSQNEKGEEGILVLTCLPTQALKAFAKVMDEVLESNQTN* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1609 451 Gene3D - 225 443 IPR023213 -
Ahy19g1609 451 Pfam Transferase family 18 442 - -
Ahy19g1609 451 PANTHER BENZYL ALCOHOL O-BENZOYLTRANSFERASE 13 446 - -
Ahy19g1609 451 Gene3D - 17 224 IPR023213 -
Ahy19g1609 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1609 Ahy-Chr19 53171830 53188333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1609 18 444 Monolignol Biosynthesis Gene Families AT5G48930 28.217 2.72e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1609 K19861 - aip:107618048 920.613