Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1576 ATGAGGTGGCGTAGCCGCCTCCGAAGTCCGAAGCTGAAGCACTGCAACTGCGCATCTCGGCAACTATTCGCCACTGGTCCTGTACTCTGCCGCCTTCATATTAGCTCAAATCCAAATCCAAATCCAATGGCTTCGGAGAAGAAACTTGCGAATCCAATGAGAGAGATTAAGGTGCAGAAGCTCGTTCTCAACATCTCCGTGGGTGAGAGTGGAGATCGTCTCACTAGAGCCGCTAAGGTGCTAGAGCAACTTAGTGGCCAAACCCCAGTGTTTTCCAAAGCAAGATACACTGTCCGTTCCTTTGGAATTAGAAGGAATGAGAAGATTGCATGCTATGTCACTGTTCGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGTTTGAAGGTTAAAGAATACGAACTTTTGAGGAGAAACTTTTCTGAGACTGGATGCTTTGGCTTTGGTATTCAGGAGCATATCGATTTGGGAATCAAGTATGATCCTTCCACTGGTATCTATGGTATGGACTTCTTCATTGTTTTGGAGCGACCAGGATACCGAGTTGGAAGGCGCAGGAGACAGAAGTCCCGTGTTGGAATTCAGCACAGGGTTACCAAAGAGGACGCTATGAAATGGTTCCAAGTGAAGTATGAGGGAGTTATTCTGAACAAGTCCCAACAAATCTCTTAA 672 0.4658 MRWRSRLRSPKLKHCNCASRQLFATGPVLCRLHISSNPNPNPMASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFFIVLERPGYRVGRRRRQKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQIS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1576 223 ProSitePatterns Ribosomal protein L5 signature. 81 97 IPR020929 GO:0003735|GO:0005840|GO:0006412
Ahy19g1576 223 Gene3D - 43 219 IPR022803 -
Ahy19g1576 223 SUPERFAMILY RL5-like 51 215 IPR022803 -
Ahy19g1576 223 Pfam Ribosomal protein L5 51 104 IPR031310 -
Ahy19g1576 223 Pfam ribosomal L5P family C-terminus 108 206 IPR031309 -
Ahy19g1576 223 PANTHER 60S RIBOSOMAL PROTEIN L11-1 30 222 - -
Ahy19g1576 223 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 30 222 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1576 Ahy-Chr19 49878206 49880718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1576 43 223 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 92.818 1.48e-125 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1576 K02868 - cit:102625025 329.331