Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1573 ATGGATGAGGACACAAATGTGGAACCAATGTTTGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTTGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCAACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAAAAGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCATGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAAACCACAAAATAATTATGGCATTGGAAACCTTAAGAGAAAACATACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTGATAAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTTTGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTAGGCAGATATATCGGGCATTAGCAAATCAGACAGGTGGCTACGAGTATCTCTCTTTCATGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCCGGTGATGCATATGAAGCTTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTTTAATCATCACATGGATGCCGATGGAACTTTGCGTAATTTATTCTGGTGCGATGGTCTCAGTAGGGCAAACTACTCATTATTTGGCGATGTGCTGGCTTTTGATGCTACCTATAGGAAGAATAAATATATGTGTCCACTGGTGGTATTTTTTGGTGTCAATCATCACAATCAAACAATTATCTTTGCTGCTGCTTTAATTTGTGATGAGGAAAAAGACACATATAGGTGGTTGCTACAACAACTGAAGGTGGCAATGAATGGGAAAGCACCTGTTTCGGTGATCACGGATGGTGATCTATCAATGAAGTTCACCATTGAAAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTCGCAATGCAACAAGTAACATTGGCAAGCCCCTGTTTACCTCCATGTTTAAAAATTGTATGCTAGGTGACTATGAAATTGATGTATTTCGTCAAAAGTGGTTTGAAATGGTTGAGGGATTTGGTATCGAAAACAAGAATTGGGTCCTAGATATGCATAAAAAGAGACATTCATGGGCAACTGCACATATAAGAGGGAAGTTTTTTGCTGGTTTTCGGACTACTTCTCGGTGCGAGGGATTAAACTCGATCATTGCAAAGTATGTCAACTCAAGGTACAATCTTGTTGAGTTCATTCAACACTTTAATCCTTGTGTCGACCATATAAGGTGGAAAGAGGTCCAGGCTGACCTCGCCTCTGTGAATGGGAGACCCAGTATGCAAACTTGTTTTCAACAGTTAAAGAGGAGTGCTGCCAATGTTTACACCCTATCAATATTTCATATGTTCCAACCAATCCTTGTACGGGCTGCATCAATGAAGGTAATAAATATGAGGCAAACTGGCTCTTATGTGATTTACTCTGTCGGTTTGGACCGAATGCCAAATGAGATGTGGCGTGTATTCTGTTGTGACATTGAGATGGAATTCAATTGTTTATGTATGAGAATGGAATCATTTGGCATACCTTGTGAACACATAGTTTGCGTCTTGGTGCATGAAGATATAGAGGAGTTACCAAGGTCATTAGTCTTGCCTCGGTGGACCAAGACTGCCAAAGTAGGTTTGCAAAATGCGGTCGGGCTTCATTGGGATTCTTTGATGCTAAGTCAATACAGTTGTTTGATGGATTGGTTTAGACAACTAGCCAACTTTGCTTGCCGAGATAACGAGAGATTTATCTTTACACGGGAAATGGCTATGAATTTGTTGAAACAATTTAAGGAGGAAGATGCTGCACAAAAAGAGTTGGTCAATGATGCAGATAGTGTAAGAGATGGTGTGCAAGTGGATGCTTTTGGAGCTGGGCTCGCAACCAATGATCTCGGATATAGCATGCCAAGGGACCCAAGAAAATATAGGACAAAAGGGGGGCTTCACAGTCTAATAAAAGAAAACATCGATGTGGACAGTGTGTCAGAAGGCCATGGAAATGACACATTTGATAATGACTCGGATGATCACATGAACATTGAAGATGACTCATTGGTATATGATGAGAATGCTTCGTACAATAGCAATGAAGTGTTGTAA 2259 0.4055 MDEDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVNIAFEFYNRYARTKSFSARKNRTRKSHAGALKLKNFVCHREGFKPQNNYGIGNLKRKHTPETRCGCSAMMEIRVDAPSGRWFISYFSDKHNHPLLDPRLTGLLPGHRFMFEADIGHMVNMKKGGISVRQIYRALANQTGGYEYLSFMQRDMYNKIAKQRRQLPGDAYEALKYLEDQATNDPSLYFNHHMDADGTLRNLFWCDGLSRANYSLFGDVLAFDATYRKNKYMCPLVVFFGVNHHNQTIIFAAALICDEEKDTYRWLLQQLKVAMNGKAPVSVITDGDLSMKFTIEKEFPNAHHRLCAWHLIRNATSNIGKPLFTSMFKNCMLGDYEIDVFRQKWFEMVEGFGIENKNWVLDMHKKRHSWATAHIRGKFFAGFRTTSRCEGLNSIIAKYVNSRYNLVEFIQHFNPCVDHIRWKEVQADLASVNGRPSMQTCFQQLKRSAANVYTLSIFHMFQPILVRAASMKVINMRQTGSYVIYSVGLDRMPNEMWRVFCCDIEMEFNCLCMRMESFGIPCEHIVCVLVHEDIEELPRSLVLPRWTKTAKVGLQNAVGLHWDSLMLSQYSCLMDWFRQLANFACRDNERFIFTREMAMNLLKQFKEEDAAQKELVNDADSVRDGVQVDAFGAGLATNDLGYSMPRDPRKYRTKGGLHSLIKENIDVDSVSEGHGNDTFDNDSDDHMNIEDDSLVYDENASYNSNEVL* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1573 752 SMART 26again6 552 579 IPR006564 GO:0008270
Ahy19g1573 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 617 IPR031052 GO:0006355
Ahy19g1573 752 Pfam FAR1 DNA-binding domain 54 144 IPR004330 -
Ahy19g1573 752 MobiDBLite consensus disorder prediction 713 733 - -
Ahy19g1573 752 ProSiteProfiles Zinc finger SWIM-type profile. 529 577 IPR007527 GO:0008270
Ahy19g1573 752 Pfam MULE transposase domain 264 358 IPR018289 -
Ahy19g1573 752 PANTHER OS02G0262500 PROTEIN 42 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1573 Ahy-Chr19 49589868 49592266 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g1573 MULE 1.60E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1573 - - ahf:112723376 1436.4