Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1548 ATGCAGGCTGAGAAAATGAAAGCTTCCAAGAAGCAATGCACAAATGAGAGTAAAATGCCAAAATCCAACAAGTCAGAAGCATCTAAGGATCCTCAAAGTGTTGCTGCTAAGAATAGAAAAGAGGGGATAAGTGAGCGGCTCAATATACTACAAGAACTAGTTCCCAATGGCTCCAAAGTTGATTTGGTTATAATGCTGGAGAAAGCAATTAGCTATGTGAAGTTTCTTCAGCTTCAAGTGAAGGTGTTAGCAGCTAATGAATTTTTGCCTGTTCAAGGTGGAAAAGTTCCTGATATCTTTCAGGCAAAAGAAGCCATTCATGCCATTCTTTCATCCCAAAGATTAGAGAAACAAGTTCAACAACCTCAAAGTAGATGA 378 0.3889 MQAEKMKASKKQCTNESKMPKSNKSEASKDPQSVAAKNRKEGISERLNILQELVPNGSKVDLVIMLEKAISYVKFLQLQVKVLAANEFLPVQGGKVPDIFQAKEAIHAILSSQRLEKQVQQPQSR* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1548 125 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 5 115 - -
Ahy19g1548 125 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 85 IPR036638 GO:0046983
Ahy19g1548 125 Gene3D - 20 84 IPR036638 GO:0046983
Ahy19g1548 125 CDD bHLH_AtIND_like 28 90 - -
Ahy19g1548 125 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 27 76 IPR011598 GO:0046983
Ahy19g1548 125 Pfam Helix-loop-helix DNA-binding domain 37 77 IPR011598 GO:0046983
Ahy19g1548 125 MobiDBLite consensus disorder prediction 1 39 - -
Ahy19g1548 125 PANTHER BHLH TRANSCRIPTION FACTOR 5 115 - -
Ahy19g1548 125 SMART finulus 33 82 IPR011598 GO:0046983
Ahy19g1548 125 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1548 Ahy-Chr19 46065150 46066964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1548 3 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 63.478 4.39e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy19g1548 HLH 6.50E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1548 - - ahf:112777299 239.965