Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1540 ATGGATGTTAATACTACTACTACTATCCCAAGTGTTGACACAAAGAGCCAGTCATACACACAGCACCAATTGCATTCAGAAAATCATGAGCATAGCCATGCTCATCTCCCCTCCAAAACCATTCTCATAGCCATTGCAGCGGCCACCACAGTTACCGTACTTCTCACCATTTTTTTTGTCCTATTCTTGCTCCGTCGACAAAAGTCTTCCAACAAGAATGGAGCCTGCAAGGATAAGAATCCAAGAGGGCTTCATGACACAAGCAGCAGACTCATTGCTTCAACAAAGTTGAGCATTAGTTCTAGTCCAGATGTGAAGGGAGGGTGTCTTCAAGGAGGAAACCTTAGTAGGTCACCAGCAGCACCTAAATTCAAAGGAGTACAAGTTTTCACATACAAGGAGATAGAAGTGGCCACAAATGGATTCAGTGAAGCACATGTCATTGGTAATGGAGGGTTTGGTTTGATGTACAGAGGAGTCCTAAGTGATGGTACTTTGGCAGCAATCAAGTTGCTACGCAGAGAAGGTAAGCAAGGGGAGCGTGCCTTCAGAGTAGAGGTCGATCTCCTAAGTCGTTTGCACTCTCCTTACTTGGTGGAGTTACTTGGTTATTGTGCAGACCAAAACCATAGGCTACTCATATTTGAGTACCTACCCCATGGCACACTCCATCAACATCTACACTCCCCTAAGAACCAATCTCAGTCGTTGGATTGGTGGGCCAGGATGAGGATAGCCCTTGATTGTGCAAGGGCCCTGGAGTTCATGCATGAGCACCATGCAGTCTCACCCGTGATCCACAGAGACTTCAAGAGTAGCAATGTGTTATTAGATCAAAATTTCCGTGCTAAAGTGTCAGATTTTGGGTTGGCAAAGATGGGATCAGAGAAGATGAACGGTCAAGTTTCCACCCGTGTGTTGGGGACCACTGGATATCTGGCCCCAGAGTGA 951 0.4616 MDVNTTTTIPSVDTKSQSYTQHQLHSENHEHSHAHLPSKTILIAIAAATTVTVLLTIFFVLFLLRRQKSSNKNGACKDKNPRGLHDTSSRLIASTKLSISSSPDVKGGCLQGGNLSRSPAAPKFKGVQVFTYKEIEVATNGFSEAHVIGNGGFGLMYRGVLSDGTLAAIKLLRREGKQGERAFRVEVDLLSRLHSPYLVELLGYCADQNHRLLIFEYLPHGTLHQHLHSPKNQSQSLDWWARMRIALDCARALEFMHEHHAVSPVIHRDFKSSNVLLDQNFRAKVSDFGLAKMGSEKMNGQVSTRVLGTTGYLAPE* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1540 316 Gene3D Transferase(Phosphotransferase) domain 1 218 316 - -
Ahy19g1540 316 SUPERFAMILY Protein kinase-like (PK-like) 122 316 IPR011009 -
Ahy19g1540 316 MobiDBLite consensus disorder prediction 1 32 - -
Ahy19g1540 316 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 7 316 - -
Ahy19g1540 316 Gene3D Phosphorylase Kinase; domain 1 116 217 - -
Ahy19g1540 316 Pfam Protein kinase domain 143 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g1540 316 MobiDBLite consensus disorder prediction 1 23 - -
Ahy19g1540 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Ahy19g1540 316 ProSiteProfiles Protein kinase domain profile. 142 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g1540 316 PANTHER OS01G0750732 PROTEIN 7 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1540 Ahy-Chr19 44886645 44889793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1540 126 316 Receptor kinase-like Gene Family AT3G58690 61.538 3.80e-83 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Ahy19g1540 Pkinase 6.60E-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1540 - - ahf:112710869 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1540 19 44886645 44889793 Ahy9g1263 9 36141263 36144450 hybridization