Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1507 ATGTGTATTAGAAAACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCTCAGCAAGTTCTCCGTCATGTCAATGTCTCTCTCCATGACGGAAGTGCGCTAGTCCTAACTGGTGCAAATGGCTCTGGCAAGACCACCTTCCTCCGCATGCTAGCTGGATTTTCCCGTCCCTCAGCCGGTGAAATTCTCTGGAATGGACACAACATACAAGATTCTGGAATCTTCCACCAGTACAAGCTCCAGCTCAACTGGCTCTCCCTCAAGGATGCAATCACTGATCGGTCCACGGTTCTCGAAAATGTTGAGTGGTTTGAGCTTCTTGAAGGAAAGTATGGCAGGGCTTTACCTGCGCTTGAGTTGATGGGGCTGGGCAGATTGGCCAAGGAGAAGCCAAGGATGCTATCCATGGGGCAGCGGAAAAGAGTGCAACTTGCAAGGTTGATTGCTCTCGATCGACCCATATGGTTGCTTGATGAGCCTTCCGTTGCGTTGGATGATGAAGGGGTGAAGTTACTTGAGTACATCATCTCGGAACATCGGAAAAATGGAGGGATTGTGATTGTGGCTACTCATTTACCTATTGAAATACATGATTCCATGTTGTTGCGGCTCCCACCCAGGTTTCCAAGGAGGATGACCTTCTTTGATATGCTTGATCGCTCCGATATTATGTAA 690 0.4826 MCIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGSALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHNIQDSGIFHQYKLQLNWLSLKDAITDRSTVLENVEWFELLEGKYGRALPALELMGLGRLAKEKPRMLSMGQRKRVQLARLIALDRPIWLLDEPSVALDDEGVKLLEYIISEHRKNGGIVIVATHLPIEIHDSMLLRLPPRFPRRMTFFDMLDRSDIM* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1507 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Ahy19g1507 229 Gene3D - 8 207 IPR027417 -
Ahy19g1507 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 223 IPR005895 GO:0017004|GO:0022857
Ahy19g1507 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 201 IPR027417 -
Ahy19g1507 229 SMART AAA_5 35 223 IPR003593 -
Ahy19g1507 229 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 208 IPR005895 GO:0017004|GO:0022857
Ahy19g1507 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1507 Ahy-Chr19 42235019 42241140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1507 24 197 Calmodulin-binding Proteins AT2G36910 24.742 3.08e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1507 - - lja:Lj0g3v0105229.1 392.889