Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1494 ATGTGTATTAGAAAACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCTCAGCATGTTCTCCGTCATGTCAATGTCTCTCTCCATAACGGAAGTGCGCTAGTCCTAACTGGTGCAAATGGCTCTGGCAAGACCACCTTCCTCTGCATGTTAGCTGGATTTTCCCGTCCCTCAGCCGGTGAAATTCTTTGGAATGGACACAACATACAAGATTCTGGAATCTTCCACCAGTACAAGCTCAAGCTCAACTGGCTCTCCCTCAAGGATGCGATCACTGATCGGTTCACGGTTCTCGAAAATGTTCAGTGGTTTGAGCTTCTTGAAGGAAAGTATGGCAAGGCTTTACCTGCGCTTGAGTTGATGGGGCTGGGCAGATTGGCCAAGGAGAAACCAAAGATGCTATCCATGGGGCAGCGGAAAAGAGTGCAACTTGCAATGTTGATTGTCGATCGACCCATATGGTTGCTTGATGAGCCTTCCGTTGCGTTGGATGATGAAGGGGTGAAGTTACTTGAGTACATCATCTCGGAACATCGGAAGAATGGAGGGATTGTGATTGTGGCTACTCATTTACCTATTGAAATACATGATTCCATGTTGTTGCGGCTCCCACCCAGGTTTCCAAGGAGGATGACTTTCTTTGATATGCTTGATCGTTCCTATATTATGTAA 687 0.4658 MCIRKPPFPRLLLNNVSCMRNAQHVLRHVNVSLHNGSALVLTGANGSGKTTFLCMLAGFSRPSAGEILWNGHNIQDSGIFHQYKLKLNWLSLKDAITDRFTVLENVQWFELLEGKYGKALPALELMGLGRLAKEKPKMLSMGQRKRVQLAMLIVDRPIWLLDEPSVALDDEGVKLLEYIISEHRKNGGIVIVATHLPIEIHDSMLLRLPPRFPRRMTFFDMLDRSYIM* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1494 228 Gene3D - 8 206 IPR027417 -
Ahy19g1494 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 222 IPR005895 GO:0017004|GO:0022857
Ahy19g1494 228 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 207 IPR005895 GO:0017004|GO:0022857
Ahy19g1494 228 SMART AAA_5 35 222 IPR003593 -
Ahy19g1494 228 Pfam ABC transporter 26 165 IPR003439 GO:0005524
Ahy19g1494 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 227 IPR003439 GO:0005524
Ahy19g1494 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 200 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1494 Ahy-Chr19 41669838 41670630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1494 24 196 Calmodulin-binding Proteins AT2G36910 24.227 1.81e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1494 - - lja:Lj0g3v0105229.1 375.17