Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1493 ATGGAGATAGCAGTGGCCATCAACCCACTACAACAAAGGGAAAGAGGGCAGAGAGATCATGTTCAAGAACCACAAGGGCCACCACAACATGAGGAAGCTTTTGTTCAACCACAATATCTACCACTTTCACCACCATATCCACAATTTCCTGAAGGTTTCAACTGGGAGCAAATGCAAGGAGATATTCATATAAACCACTTGAGAAAGGATGTTGTAGAATCTGTAAACAAGCTTGCTCAAATTATGAAGGATTTATCAGTCCTAGTCATTGACCAGGGTATGATTGTTGATAGAATAGACTACAACATTCAGAATGTAGCCACTATAGTTGAAGATGGCCTTAAACAGCTTCAGAAGGCAGAGAGAAACCAGAAAAAGGGGGCATGGTGA 390 0.4154 MEIAVAINPLQQRERGQRDHVQEPQGPPQHEEAFVQPQYLPLSPPYPQFPEGFNWEQMQGDIHINHLRKDVVESVNKLAQIMKDLSVLVIDQGMIVDRIDYNIQNVATIVEDGLKQLQKAERNQKKGAW* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1493 129 SUPERFAMILY SNARE fusion complex 70 125 - -
Ahy19g1493 129 Gene3D - 60 128 - -
Ahy19g1493 129 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 71 120 IPR000727 -
Ahy19g1493 129 MobiDBLite consensus disorder prediction 1 31 - -
Ahy19g1493 129 CDD SNARE_syntaxin16 71 119 - -
Ahy19g1493 129 PANTHER SYNTAXIN 53 127 IPR045242 -
Ahy19g1493 129 Pfam SNARE domain 95 128 IPR000727 -
Ahy19g1493 129 PANTHER SYNTAXIN OF PLANTS PROTEIN 53 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1493 Ahy-Chr19 41647926 41667810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1493 71 129 SNARE and Associated Proteins AT5G26980 83.051 7.26e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1493 K08489 - ahf:112778287 258.455