Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy19g1487 | ATGTCAAACATAACAAGTTGTGATAGTGGGAGCTTCTCAACAGAGAACACAGTTCCATTATTAGAAGATGCAGTGGTGAAACAACAATCTTCAGAGATTCTTGGTGGTAGGTTCCATCATAGTCCACATTCTCATACTTCAACAACAACAACAAATAATAAAAATAATAATAGCAATGCTTCCAACTCAAATTCTCAACCTCCTCCTCCACCTCCTAAGAAGAAAAGGAACCTACCGGGAAATCCAGATCCCAGTGCTGAAGTGATAGCTCTATCACCAACAACACTAATGGCCACAAACCGCTTCATATGCGAAATATGTAACAAAGGGTTTCAAAGAGACCAGAACCTTCAGCTTCATCGGCGAGGACACAACCTGCCGTGGAAGCTGAAGCAGCGAACGAGCACGGAGGTGAGAAAGAGAGTATATGTGTGTCCTGAGTCCTCGTGCGTTCACCACAATCCCGCGAGGGCGTTGGGTGACCTCACGGGGATCAAGAAACACTTTTGTAGGAAGCATGGTGAGAAAAAGTGGAAATGTGATAAGTGCTCAAAGAAATATGCTGTTCAATCTGACTGGAAGGCACATTCCAAAATATGCGGTACAAGGGAGTACAAATGTGACTGTGGCACCATCTTTTCCAGAAGAGATAGCTTCATCACCCACAGAGCATTCTGCGACGCACTTGCAGAGGAGAACAACAACAAGAACGAAGGATCATTATTCCCAAACATACCTTCAAATCTCCAATCCCAACCCCAAATCCCAAACCTCCTTCTTCCCTCTCTACCAATCACCACCACCCCCACCACTCTTTCTTCATCCTCCTCACTCCCTCTTCACCACGACCTCATCATTCCAAAACCCTCATTCAACAACATACCCTTCCCGAGAAACCCCAACACCACCTCCACCACCACCATCTTCGATGACAACGCCCTCCACTTAACTGCGTCGTCGTCATCACTGTCCTCGCCGCACATGTCAGCCACCGCACTGCTTCAGAAAGCAGCGCAAATGGGTGCAACCGTCAGCAGCAGCAACAACAACATAGTAGTGGAGAATAGCAACAAGGGTGGCGGTTATGTAACCGCCACAACAAGCATGGCGCCGCCATCGTTTAGCGGAGTAGCTCCAGTGCAACAGAATGTGAATAACAATAATAACAGTTTGTTCATGAACCAGTTCATGCAACAAGACATGGCTACTACTCCTCATCATTATGGTAATTTGATGTGTGGAATGAACGGTGTGGATATGTTCAACGCTATATTGGACCAAAGCAAGGCACTGTCCAAGATCATTGACCACAGTAACCACCACCGCGAAAGTGCGGTGACGAAAAGGGAGTGTACTAAGGGTGGAAGTATCGGGGGTAATAGTGATGTGATGACGTTGGACTTGTTGGGAATAGGAGGAGGCGGCGGCGGTGGACATAATGGAAGTGGTGGTTTCTATGGCGGTGGTAATAATAATAATAACCAGCAACAAGGAGATAATAATGGTGCAGCAAGTGTAAGAGATGAGGTTTGGAATTGGTCAACGAAGAACGCAGGTTTTGAATCCTTCTCAGCAACAAGCAGCATTTGA | 1590 | 0.4642 | MSNITSCDSGSFSTENTVPLLEDAVVKQQSSEILGGRFHHSPHSHTSTTTTNNKNNNSNASNSNSQPPPPPPKKKRNLPGNPDPSAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEVRKRVYVCPESSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNNKNEGSLFPNIPSNLQSQPQIPNLLLPSLPITTTPTTLSSSSSLPLHHDLIIPKPSFNNIPFPRNPNTTSTTTIFDDNALHLTASSSSLSSPHMSATALLQKAAQMGATVSSSNNNIVVENSNKGGGYVTATTSMAPPSFSGVAPVQQNVNNNNNSLFMNQFMQQDMATTPHHYGNLMCGMNGVDMFNAILDQSKALSKIIDHSNHHRESAVTKRECTKGGSIGGNSDVMTLDLLGIGGGGGGGHNGSGGFYGGGNNNNNQQQGDNNGAASVRDEVWNWSTKNAGFESFSATSSI* | 530 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy19g1487 | 529 | MobiDBLite | consensus disorder prediction | 31 | 86 | - | - | |
Ahy19g1487 | 529 | SMART | c2h2final6 | 178 | 198 | IPR013087 | - | |
Ahy19g1487 | 529 | SMART | c2h2final6 | 143 | 173 | IPR013087 | - | |
Ahy19g1487 | 529 | SMART | c2h2final6 | 102 | 124 | IPR013087 | - | |
Ahy19g1487 | 529 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 102 | 124 | IPR013087 | - | |
Ahy19g1487 | 529 | Gene3D | Classic Zinc Finger | 81 | 151 | - | - | |
Ahy19g1487 | 529 | MobiDBLite | consensus disorder prediction | 41 | 63 | - | - | |
Ahy19g1487 | 529 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 104 | 124 | IPR013087 | - | |
Ahy19g1487 | 529 | MobiDBLite | consensus disorder prediction | 64 | 78 | - | - | |
Ahy19g1487 | 529 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 2-LIKE | 47 | 474 | - | - | |
Ahy19g1487 | 529 | SUPERFAMILY | beta-beta-alpha zinc fingers | 101 | 198 | IPR036236 | - | |
Ahy19g1487 | 529 | Pfam | Zinc-finger double-stranded RNA-binding | 102 | 124 | IPR022755 | - | |
Ahy19g1487 | 529 | MobiDBLite | consensus disorder prediction | 482 | 502 | - | - | |
Ahy19g1487 | 529 | MobiDBLite | consensus disorder prediction | 485 | 502 | - | - | |
Ahy19g1487 | 529 | Gene3D | Classic Zinc Finger | 156 | 236 | - | - | |
Ahy19g1487 | 529 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 47 | 474 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy19g1487 | Ahy-Chr19 | 40081469 | 40088133 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy19g1487 | 48 | 345 | IDZ Gene Family | AT3G50700 | 54.467 | 6.30e-115 | 346 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Ahy19g1487 | zf-C2H2_jaz | 7.80E-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy19g1487 | - | - | adu:107465334 | 818.92 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy16g0592 | 16 | 11171067 | 11172988 | Ahy19g1487 | 19 | 40081469 | 40088133 | ECH | |
Ahy19g1487 | 19 | 40081469 | 40088133 | Ahy19g1487 | 19 | 40081469 | 40088133 | ECH | |
Ahy19g1487 | 19 | 40081469 | 40088133 | Ahy9g1203 | 9 | 31890686 | 31897450 | hybridization | |
Ahy16g0951 | 16 | 17077879 | 17081879 | Ahy19g1487 | 19 | 40081469 | 40088133 | PCT | |
Ahy6g0410 | 6 | 5118707 | 5122558 | Ahy19g1487 | 19 | 40081469 | 40088133 | PCT |